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Table 1 Genetic variability analysis of hollyhock-associated alphasatellites

From: Roles of two distinct alphasatellites modulating geminivirus pathogenesis

Parameter useda

GDarSLA

CLCuMuA

N

94

169

L

1377

1571

s

459

571

η

573

797

Ï€

0.05345

0.07104

k

56.92052

75.65716

θ–w

0.08567 (Tajima's D: − 1.21539; NS, P > 0.10)

0.09257 (Tajima's D: − 0.85623; NS, P > 0.10)

θ–η

0.10950 (Tajima's D: − 1.69642; NS, P > 0.10)

0.12843 (Tajima's D: − 1.52847; NS, P > 0.10)

Hdb

0.991** (− 3.45070**)

0.998** (− 3.86968**)

  1. aN, total number of sequence analyzed; L, length; s, total number of segregating sites; η, total number of mutations; π, nucleotide diversity for complete genome; k, average number of nucleotide differences between sequences; θ–w, Watterson’s estimate of the population mutation rate based on the total number of segregating sites; θ–η, Watterson’s estimate of the population mutation rate based on the total number of mutations; and Hd, gene diversity
  2. bHd = gene diversity; for GDarSLA = Fu and Li's D* test statistic: − 3.45070; Statistical significance: **, P < 0.02; Fu and Li's F* test statistic: − 3.22012; Statistical significance: **, P < 0.02 and for CLCuMuA = Fu and Li's D* test statistic: − 3.86968; Statistical significance: **, P < 0.02; Fu and Li's F* test statistic: − 3.24863; Statistical significance: **, P < 0.02. NS, Non-significant
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Virology Journal

ISSN: 1743-422X