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Table 3 Amino acid variations in the major antigenic sites of VP1 between the recently circulating FMDV strains and the vaccinal strains in Egypt

From: Molecular detection, phylogenetic analysis and genetic diversity of recently isolated foot-and-mouth disease virus serotype A African topotype, Genotype IV

No Residue position Viral strain
Vaccine strain (A/Iran-05) Vaccine strain (A/Egy/1/2012) New Egyptian samples
1 42 I I V
2 43 S N T
3 44 P P S
4 45 V A T
5 46 S S A
6 60 A A G
7 133 V V T
8 134 S S A
9 137 S S T
10 138 T A A
11 139 T T G
12 140 G G T
13 141 N G S
14 142 G D P
15 149 P S A
16 156 A A T
17 198 Q Q G
18 201 H H Y