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Table 3 Amino acid variations in the major antigenic sites of VP1 between the recently circulating FMDV strains and the vaccinal strains in Egypt

From: Molecular detection, phylogenetic analysis and genetic diversity of recently isolated foot-and-mouth disease virus serotype A African topotype, Genotype IV

No

Residue position

Viral strain

Vaccine strain (A/Iran-05)

Vaccine strain (A/Egy/1/2012)

New Egyptian samples

1

42

I

I

V

2

43

S

N

T

3

44

P

P

S

4

45

V

A

T

5

46

S

S

A

6

60

A

A

G

7

133

V

V

T

8

134

S

S

A

9

137

S

S

T

10

138

T

A

A

11

139

T

T

G

12

140

G

G

T

13

141

N

G

S

14

142

G

D

P

15

149

P

S

A

16

156

A

A

T

17

198

Q

Q

G

18

201

H

H

Y

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Virology Journal

ISSN: 1743-422X