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Table 1 Comparison between mutations identified in variant Gamma described in Amazonas, Santa Catarina and Rio Grande do Sul (Gamma-AM, Gamma-SC and Gamma-RS) and in eight Gamma samples from Paraná (Gamma-PR)

From: Re-emergence of Gamma-like-II and emergence of Gamma-S:E661D SARS-CoV-2 lineages in the south of Brazil after the 2021 outbreak

Protein Gamma-PR Gamma-SC Gamma-AM Gamma-RS
C09 D01 A09 A08 E09 C10 E02 E03
N P80R P80R P80R P80R P80R P80R P80R P80R P80R P80R P80R
R203K R203K R203K R203K R203K R203K R203K R203K R203K R203K R203K
G204R G204R G204R G204R G204R G204R G204R G204R G204R G204R G204R
ORF1a S1188L S1188L S1188L S1188L S1188L S1188L S1188L S1188L S1188L S1188L S1188L
K1795Q K1795Q K1795Q K1795Q K1795Q K1795Q K1795Q K1795Q K1795Q K1795Q K1795Q
ORF1b P314L P314L P314L P314L P314L P314L P314L P314L P314L P314L P314L
E1264D E1264D E1264D E1264D E1264D E1264D E1264D E1264D E1264D E1264D E1264D
ORF3a S253P S253P S253P S253P S253P S253P S253P S253P S253P S253P S253P
ORF8 E92K E92K E92K E92K E92K E92K E92K E92K E92K E92K E92K
ORF9b Q77E Q77E Q77E Q77E Q77E Q77E Q77E Q77E Q77E Q77E Q77E
Spike L18F L18F L18F L18F L18F L18F L18F L18F L18F L18F L18F
T20N T20N T20N T20N T20N T20N T20N T20N T20N T20N T20N
P26S P26S P26S P26S P26S P26S P26S P26S P26S P26S P26S
D138Y D138Y D138Y D138Y D138Y D138Y D138Y D138Y D138Y D138Y D138Y
R190S R190S R190S R190S R190S R190S R190S R190S R190S R190S R190S
K417T K417T K417T K417T K417T K417T K417T K417T K417T K417T K417T
E484K E484K E484K E484K E484K E484K E484K E484K E484K E484K
N501Y N501Y N501Y N501Y N501Y N501Y N501Y N501Y N501Y N501Y
D614G D614G D614G D614G D614G D614G D614G D614G D614G D614G D614G
H655Y H655Y H655Y H655Y H655Y H655Y H655Y H655Y H655Y H655Y H655Y
E661D E661D E661D E661D E661D E661D E661D E661D
T1027I T1027I T1027I T1027I T1027I T1027I T1027I T1027I T1027I T1027I T1027I
V1176F V1176F V1176F V1176F V1176F V1176F V1176F V1176F V1176F V1176F V1176F
  1. Corresponding identifiers in the GISAID database EP_ISL_2759001 (A08); EP_ISL_2759002 (A09); EP_ISL_2759011 (C09); EP_ISL_2759016 (C10); EP_ISL_2759036 (D01); EP_ISL_2759037 (E02); EP_ISL_2759044 (E03); EP_ISL_2759058 (E09); EP_ISL_1534008 (Gamma-SC); EP_ISL_1064736 (Gamma-AM) and EP_ISL_2086592 (Gamma-RS)