Flavivirus Target gene | Primer name | Nucleotide sequence (5′-3′) | Product size (bp) | PCR protocol (˚C/s) | Reference | |||
---|---|---|---|---|---|---|---|---|
Denaturation | Annealing | Extension | Cycles | |||||
NS5 | PanF-NS5-1373F PanF-NS5-2481R | AACATGATGGGVAARAGAGAG ATCCACACHCKGTTCCASAC | 1108 | 94/60 | 52/60 | 72/60 | 35 | In-house design |
FL-F1 FL-R3 FL-R4 | GCCATATGGTACATGTGGCTGGGAGC GTKATTCTTGTGTCCCAWCCGGCTGTGTCATC GTGATGCGRGTGTCCCAGCCRGCKGTGTCATC | 212 | 94/30 | 58/30 | 72/30 | 30 | [14] |