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Table 3 Genotyping results

From: Relationship between polymorphism of receptor SCARB2 gene and clinical severity of enterovirus-71 associated hand-foot-mouth disease

  

Allele N

Genotype N (%)

MAF (A1)

H–W P value

A1

A2

   

Undetected

rs1051326

 

C

G

CC 21

GG 39

CG 35

5

  

Case

49

59

14

19

21

2

0.405

0.021

Control

28

54

7

20

14

3

  

rs1465923

 

C

T

CC 0

TT 92

TC 8

   

Case

5

107

0

51

5

 

0.040

1.000

Control

3

85

0

41

3

   

rs1470194

 

C

A

CC 8

AA 51

CA 41

   

Case

31

81

2

27

27

 

0.285

1.000

Control

26

62

6

24

14

   

rs2119733

 

A

T

AA 0

TT 97

TA 3

   

Case

2

110

0

54

2

 

0.015

1.000

Control

1

87

0

43

1

   

rs3733255

 

T

C

TT 0

CC 92

TC 8

   

Case

6

106

0

50

6

 

0.040

1.000

Control

2

86

0

42

2

   

rs3733256

 

C

G

CC 0

GG 92

CG 8

   

Case

6

106

0

50

6

 

0.040

1.000

Control

2

86

0

42

2

   

rs57374265

 

A

G

AA 13

GG 36

GA 51

   

Case

47

65

8

17

31

 

0.385

0.529

Control

30

58

5

19

20

   

rs6824953

 

C

G

CC 6

GG 43

GC 50

1

  

Case

31

79

3

27

25

1

0.313

0.106

Control

31

57

3

16

25

   

rs75285019

 

A

G

AA 0

GG 92

AG 8

   

Case

6

106

0

50

6

 

0.040

1.000

Control

2

86

0

42

2

   

rs7697073

 

C

T

CC 16

TT 36

CT 48

   

Case

47

65

11

20

25

 

0.400

1.000

Control

33

55

5

16

23

   

rs78737354

 

T

C

TT 13

CC 46

CT 41

   

Case

39

73

6

23

27

 

0.335

0.500

Control

28

60

7

23

14

   

rs8475

 

A

T

AA 13

TT 36

TA 51

   

Case

47

65

8

17

31

 

0.385

0.529

Control

30

58

5

19

20

   

rs6812193

 

T

C

TT 1

CC 83

CT 16

   

Case

15

97

1

42

13

 

0.090

0.568

Control

3

85

0

41

3

   
  1. Undetected: locus detection rate > 95%, which meets the requirements for locus detection