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Table 3 Genotyping results

From: Relationship between polymorphism of receptor SCARB2 gene and clinical severity of enterovirus-71 associated hand-foot-mouth disease

   Allele N Genotype N (%) MAF (A1) H–W P value
A1 A2     Undetected
rs1051326   C G CC 21 GG 39 CG 35 5   
Case 49 59 14 19 21 2 0.405 0.021
Control 28 54 7 20 14 3   
rs1465923   C T CC 0 TT 92 TC 8    
Case 5 107 0 51 5   0.040 1.000
Control 3 85 0 41 3    
rs1470194   C A CC 8 AA 51 CA 41    
Case 31 81 2 27 27   0.285 1.000
Control 26 62 6 24 14    
rs2119733   A T AA 0 TT 97 TA 3    
Case 2 110 0 54 2   0.015 1.000
Control 1 87 0 43 1    
rs3733255   T C TT 0 CC 92 TC 8    
Case 6 106 0 50 6   0.040 1.000
Control 2 86 0 42 2    
rs3733256   C G CC 0 GG 92 CG 8    
Case 6 106 0 50 6   0.040 1.000
Control 2 86 0 42 2    
rs57374265   A G AA 13 GG 36 GA 51    
Case 47 65 8 17 31   0.385 0.529
Control 30 58 5 19 20    
rs6824953   C G CC 6 GG 43 GC 50 1   
Case 31 79 3 27 25 1 0.313 0.106
Control 31 57 3 16 25    
rs75285019   A G AA 0 GG 92 AG 8    
Case 6 106 0 50 6   0.040 1.000
Control 2 86 0 42 2    
rs7697073   C T CC 16 TT 36 CT 48    
Case 47 65 11 20 25   0.400 1.000
Control 33 55 5 16 23    
rs78737354   T C TT 13 CC 46 CT 41    
Case 39 73 6 23 27   0.335 0.500
Control 28 60 7 23 14    
rs8475   A T AA 13 TT 36 TA 51    
Case 47 65 8 17 31   0.385 0.529
Control 30 58 5 19 20    
rs6812193   T C TT 1 CC 83 CT 16    
Case 15 97 1 42 13   0.090 0.568
Control 3 85 0 41 3    
  1. Undetected: locus detection rate > 95%, which meets the requirements for locus detection
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Virology Journal

ISSN: 1743-422X