Skip to main content

Table 2 HMPV and RSV subgroup detection patterns

From: Comparative analysis of spatial-temporal patterns of human metapneumovirus and respiratory syncytial virus in Africa using genetic data, 2011–2014

Country A2.1 A2.2 B1 B2 Total
(A) HMPV subgroup detection
Kenya 0 21 21 16 58
Gambia 0 12 27 2 41
Mali 0 8 32 0 40
South Africa 6 33 15 4 58
Zambia 12 10 12 1 35
Total 18 84 107 23 232
Country RSVA_ON1 RSVA_GA2 RSVB_BA Total
(B) RSV subgroup detection
Kenya 114 42 107 263
Gambia 2 8 89 99
Mali 5 47 106 158
South Africa 13 188 29 230
Zambia 29 61 2 92
Total 163 346 333 842
  1. Total number of HMPV and RSV sequences obtained from samples collected between August 2011 and January 2014 from the 5 African countries. Panel A: Total number of HMPV sequences obtained by HMPV subgroup for each study site. Panel B: Total number of RSV sequences obtained by RSV subgroup for each study site
  2. HMPV, human metapneumovirus; RSV, respiratory syncytial virus