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Table 1 Virus positive by site and number sequenced

From: Comparative analysis of spatial-temporal patterns of human metapneumovirus and respiratory syncytial virus in Africa using genetic data, 2011–2014

Site Enrollment date No. of samples Cases Controls Total sequenced
No. of cases No. sequenced No. of controls No. sequenced
(A) HMPV        
Gambia November 2011–October 2013 46 37 32 9 9 41
Kenya August 2011–November 2013 62 50 50 13 8 58
Mali January 2012–January 2014 46 39 34 7 6 40
South Africa August 2011–August 2013 77 55 44 22 14 58
Zambia October 2011–October 2013 47 39 30 8 5 35
Totals   278 200 190 59 42 232
Site Enrollment date No. of samples Cases Controls Total sequenced
No. of cases No. sequenced No. of controls No. sequenced
(B) RSV        
Gambia November 2011–October 2013 117 113 97 4 2 99
Kenya August 2011–November 2013 263 251 251 12 12 263
Mali January 2012–January 2014 182 154 138 28 20 158
South Africa August 2011–August 2013 260 232 208 28 22 230
Zambia October 2011–October 2013 112 94 82 18 10 92
Totals   934 844 776 90 66 842
  1. Total number of HMPV and RSV positive samples collected between August 2011 and January 2014 from 5 African countries. Panel A: Total number of HMPV sequences stratified by cases and controls, and total sequenced. Panel B: Total number of RSV sequences stratified by cases and controls, and total sequenced
  2. HMPV, human metapneumovirus; RSV, respiratory syncytial virus