Table 6 HPV39 E6/E7/L1 positive selection site
From: Genetic variability of human papillomavirus type 39 based on E6, E7 and L1 genes in Southwest China
Positively selected sites (50 significance level) | ||||||
|---|---|---|---|---|---|---|
Gene | Codon | E[dS] | E[dN] | Normalized E[dN-dS] | Posterior Probability | Bayes Factor |
| Â | 26 | 1 | 10.0336 | 9.03359 | 0.929216 | 419.403 |
E6 | 87 | 1 | 10.0987 | 9.0987 | 0.935251 | 461.476 |
| Â | 151 | 1 | 10.7965 | 9.79648 | 0.999941 | 538.503 |
E7 | Found no Positively selected sites (50 significance level) | |||||
| Â | 75 | 0.561634 | 2.3459 | 1.78427 | 0.965567 | 587.849 |
| Â | 180 | 0.626187 | 2.25204 | 1.62585 | 0.921948 | 247.618 |
| Â | 222 | 0.7726 | 2.24721 | 1.47461 | 0.908844 | 209.008 |
L1 | 272 | 0.438175 | 2.25315 | 1.81497 | 0.936722 | 310.324 |
| Â | 284 | 0.514167 | 2.25028 | 1.73612 | 0.929747 | 277.434 |
| Â | 346 | 0.649058 | 2.25464 | 1.60559 | 0.921272 | 245.31 |
| Â | 356 | 0.840996 | 2.24741 | 1.40641 | 0.903727 | 196.783 |