Table 3 Nucleotide mutations and amino acid substitution in HPV 39 L1
From: Genetic variability of human papillomavirus type 39 based on E6, E7 and L1 genes in Southwest China
Sequence | L1 base mutation site | n = 298 | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | 5777 | 5865 | 6056 | 6134 | 6180 | 6257 | 6306 | 6380 | 6428 | 6456 | 6479 | 6493 | 6500 | 6506 | 6569 | 6638 | 6668 | 6679 | 6710 | 6785 | 6854 | 6869 | 6903 | 6956 | 6974 | 7064 | Â |
M62849 | A | G | C | T | T | A | G | C | T | G | A | A | T | T | T | T | A | C | T | C | T | A | C | A | A | C | Â |
39PL01 | – | – | T | – | – | G | – | – | – | – | – | – | – | – | – | A | – | – | – | – | – | – | T | – | – | – | 25 |
39PL02 | G | – | – | – | – | – | – | – | – | – | – | – | – | – | – | A | – | – | – | – | – | – | T | – | – | – | 36 |
39PL03 | G | – | – | – | – | – | – | – | – | – | – | – | – | – | G | A | – | – | – | A | C | – | T | – | – | – | 20 |
39PL04 | – | – | – | C | C | – | – | T | – | C | – | C | – | G | – | – | C | G | G | A | – | G | T | – | G | A | 16 |
39PL05 | – | – | T | – | – | – | – | – | – | – | – | – | – | – | G | A | – | – | – | A | C | – | T | – | – | – | 23 |
39PL06 | G | A | – | – | – | – | – | – | – | – | – | – | – | – | – | A | – | – | – | – | – | – | T | – | – | – | 29 |
39PL07 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | A | – | – | – | A | C | – | T | – | – | – | 27 |
39PL08 | G | A | – | – | – | – | – | – | – | – | – | – | – | – | – | A | – | – | – | A | C | – | T | – | – | – | 14 |
39PL09 | G | – | – | – | – | – | – | – | – | – | – | – | – | – | – | A | – | – | – | A | C | – | T | – | – | – | 17 |
39PL10 | – | – | T | – | – | – | – | – | – | – | – | – | – | – | G | A | – | – | – | – | – | – | T | – | – | – | 8 |
39PL11 | G | A | – | – | – | – | – | – | – | – | G | – | – | – | – | A | – | – | – | A | C | – | T | G | – | – | 9 |
39PL12 | – | – | – | – | – | – | – | – | C | – | – | – | – | – | – | A | – | – | – | – | – | – | T | – | – | – | 18 |
39PL13 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | A | – | – | – | – | – | – | T | – | – | – | 12 |
39PL14 | – | – | – | – | – | – | – | – | – | – | – | – | C | – | – | – | – | – | – | – | – | – | T | – | – | – | 27 |
39PL15 | – | – | T | – | – | – | – | – | – | – | – | – | – | – | – | A | – | – | – | – | – | – | T | – | – | – | 11 |
39PL16 | – | – | T | – | – | – | A | – | – | – | – | – | – | – | G | A | – | – | – | – | – | – | T | – | – | – | 6 |
Amino acid mutation | V | V75M | T | I | S180P | G | D222N | F | R | A272P | T | N284T | G | S | P | V | T | S346C | D356E | V | F | P | L | K | L | V | Â |