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Table 2 Nucleotide mutations and amino acid substitution in HPV39 E6/E7

From: Genetic variability of human papillomavirus type 39 based on E6, E7 and L1 genes in Southwest China

Sequence

E6 base mutation site

E7 base mutation site

n = 306

 

184

205

211

289

366

487

558

559

596

633

634

762

792

819

820

851

853

858

862

 

M62849

G

C

C

A

C

T

T

A

G

T

T

T

G

G

C

G

C

A

C

 

39PE01

–

–

–

–

–

–

–

–

–

–

–

–

C

–

–

–

–

–

–

24

39PE02

–

–

–

–

–

–

C

–

–

–

–

–

–

–

–

–

G

–

–

35

39PE03

–

T

–

–

–

–

C

–

–

–

–

–

–

–

–

–

G

–

–

18

39PE04

T

–

–

T

G

C

–

G

–

–

C

A

–

–

T

A

–

–

A

17

39PE05

–

–

–

–

–

–

–

–

A

–

–

–

–

–

–

–

–

–

–

23

39PE06

–

–

T

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

46

39PE07

–

–

–

–

–

–

–

–

–

–

–

 

C

A

–

–

–

–

 

25

39PE08

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

12

39PE09

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

A

14

39PE10

–

–

–

–

–

–

–

–

–

G

–

–

–

–

–

–

G

–

–

28

39PE11

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

T

–

29

39PE12

–

–

–

–

–

–

G

–

–

–

–

–

C

–

–

–

–

–

–

14

39PE13

–

–

–

–

–

–

G

–

A

–

–

–

–

–

–

–

–

–

–

21

Amino acid mutation

Q26H

V

C

P

A87G

F

L151P/R

L

R2H

D14E

L

D57E

S

Q

L

R87Q

Q88E

L

Q91K

Â