Table 1 Identity percentages between the genomes of PoPeVYV and with those of closely related species
5′NCR | P0 | P1 | P2 | iNCR | P3a | P3 | P4 | RTD | 3′NCR | Full genome | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
nt | aa | nt | aa | nt | aa | nt | nt | aa | nt | aa | nt | aa | nt | aa | nt | nt | nt | |
PoPeVYV | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 |
PeVYV-1 | 98.0 | 83.5 | 88.9 | 89.8 | 91.9 | 93.4 | 93.3 | 96.3 | 97.8 | 97.8 | 94.2 | 93.1 | 89.7 | 94.7 | 49.5 | 55.8 | 92.4 | 84.6 |
PeVYV-2 | 98.0 | 83.9 | 88.9 | 89.9 | 92.1 | 94.7 | 93.8 | 92.5 | 91.1 | 92.0 | 93.1 | 92.8 | 87.6 | 93.3 | 65.9 | 68.9 | 88.0 | 87.0 |
PeVYV-3 | 98.0 | 87.1 | 90.5 | 90.8 | 92.6 | 93.9 | 92.7 | 95.1 | 100 | 97.8 | 94.2 | 94.7 | 90.4 | 94.7 | 49.7 | 60.6 | 91.6 | 85.0 |
PeVYV-4 | 66.0 | 85.1 | 89.2 | 90.1 | 91.5 | 94.4 | 93.7 | 92.5 | 95.6 | 94.9 | 92.7 | 92.6 | 91.0 | 94.5 | 49.1 | 55.8 | 92.4 | 84.1 |
PeVYV-5 | 96.0 | 77.5 | 85.2 | 87.2 | 90.3 | 95.0 | 93.5 | 92.5 | 93.3 | 94.9 | 94.2 | 94.4 | 92.9 | 95.8 | 51.8 | 57.2 | 92.7 | 84.1 |
PeVYV-6 | 96.0 | 85.1 | 89.6 | 90.5 | 92.9 | 95.0 | 94.1 | 90.0 | 95.6 | 94.2 | 94.7 | 94.2 | 92.3 | 95.8 | 51.8 | 58.4 | 92.7 | 85.3 |
TVDV | 81.6 | 76.3 | 81.3 | 77.2 | 83.0 | 90.8 | 88.6 | 84.8 | 95.6 | 87.7 | 89.8 | 92.2 | 84.6 | 90.9 | 89.7 | 91.9 | 88.6 | 87.8 |