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Table 1 Identity percentages between the genomes of PoPeVYV and with those of closely related species

From: Pod pepper vein yellows virus, a new recombinant polerovirus infecting Capsicum frutescens in Yunnan province, China

  5′NCR P0 P1 P2 iNCR P3a P3 P4 RTD 3′NCR Full genome
nt aa nt aa nt aa nt nt aa nt aa nt aa nt aa nt nt nt
PoPeVYV 100 100 100 100 100 100 100 100 100 100 100 100 100 100 100 100 100 100
PeVYV-1 98.0 83.5 88.9 89.8 91.9 93.4 93.3 96.3 97.8 97.8 94.2 93.1 89.7 94.7 49.5 55.8 92.4 84.6
PeVYV-2 98.0 83.9 88.9 89.9 92.1 94.7 93.8 92.5 91.1 92.0 93.1 92.8 87.6 93.3 65.9 68.9 88.0 87.0
PeVYV-3 98.0 87.1 90.5 90.8 92.6 93.9 92.7 95.1 100 97.8 94.2 94.7 90.4 94.7 49.7 60.6 91.6 85.0
PeVYV-4 66.0 85.1 89.2 90.1 91.5 94.4 93.7 92.5 95.6 94.9 92.7 92.6 91.0 94.5 49.1 55.8 92.4 84.1
PeVYV-5 96.0 77.5 85.2 87.2 90.3 95.0 93.5 92.5 93.3 94.9 94.2 94.4 92.9 95.8 51.8 57.2 92.7 84.1
PeVYV-6 96.0 85.1 89.6 90.5 92.9 95.0 94.1 90.0 95.6 94.2 94.7 94.2 92.3 95.8 51.8 58.4 92.7 85.3
TVDV 81.6 76.3 81.3 77.2 83.0 90.8 88.6 84.8 95.6 87.7 89.8 92.2 84.6 90.9 89.7 91.9 88.6 87.8
  1. aNCR noncoding region, iNCR intergenic NCR, aa amino acid, nt nucleotide. Highest percentages are underlined and in bold
  2. bPeVYV-1 (Pepper vein yellows virus-1, AB594828), PeVYV-2 (Pepper vein yellows virus-2, HM439608), PeVYV-3 (Pepper vein yellows virus-3, KP300822), PeVYV-4 (Pepper vein yellows virus-4, KU999109), PeVYV-5 (Pepper vein yellows virus-5, KY523072), PeVYV-6 (Pepper vein yellows virus-6, LT559483), TVDV (Tobacco vein distorting virus, EF529624), PoPeVYV (Pod pepper vein yellows virus, MT188667)
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