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Fig. 4 | Virology Journal

Fig. 4

From: Role of human Pegivirus infections in whole Plasmodium falciparum sporozoite vaccination and controlled human malaria infection in African volunteers

Fig. 4

Phylogenetic inferences of the HPgV-1 isolates based on 5′ UTR. Phylogenetic tree was constructed using Neighbour joining method and Kimura two-parameter model of the 5′ UTR. The 5′ UTR sequences from Tanzania and Equatorial Guinea (n = 26) were compared to selected references spanning genotype 1 to 7 from different countries available in the NCBI database. The accession numbers for the reference sequences were: AF488786, AF488789, KC618399, KP710602, U36388, JX494177, Y16436, and MF398547 (Genotype 1, Pink); AB003289, AF104403, D90600, JX494179, MG229668, JX494180, U4402, U59518 (Genotype 2; 2a light brown), MH000566, U59529, U63715, MH053130 (Genotype 2; 2b Brown); AB008335, KR108695, JX494176, D87714 (Genotype 3, Green); AB0188667, AB021287, HQ3311721 (Genotype 4, Maroon); DQ117844, AY949771, AF488796, AF488797 (Genotype 5, Light blue), AB003292, AF177619 (Genotype 6, Bright green); HQ331235, HQ 3312233 (Genotype 7, Golden) and Hepatitis C (AJ132997, Black) was used as outgroup

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Virology Journal

ISSN: 1743-422X