The first complete genome sequence of the African swine fever virus genotype X and serogroup 7 isolated in domestic pigs from the Democratic Republic of Congo

Bisimwa, Patrick N.; Ongus, Juliette R.; Steinaa, Lucilla; Bisimwa, Espoir B.; Bochere, Edwina; Machuka, Eunice M.; Entfellner, Jean-Baka Domelevo; Okoth, Edward; Pelle, Roger

doi:10.1186/s12985-021-01497-0

Virology Journal

Table 4 Uvira B53 polymorphic ORFs with respect to Ken05/Tk1 and Kenya 1950

From: The first complete genome sequence of the African swine fever virus genotype X and serogroup 7 isolated in domestic pigs from the Democratic Republic of Congo

Gene	Function	References	% sequence identity to
Gene	Function	References	Ken05/Tk1	Kenya 1950
A859L	Helicase superfamily II	[14]	99.4	100
B117L	Transmembrane region containing protein	[14]	90	77.1
B169L	Putative signal peptide	[14]	91.5	98.8
B407L	Unknown	[14]	97.3	99.5
B475L	Unknown	[14]	99.6	95.8
C84L	Putative signal peptide	[14]	98.5	97
CP123L	Putative signal peptide	[14]	100	99.2
D129L	Unknown	[14]	86	92.7
E146L (j16L)	Putative signal peptide	[14]	98.6	100
E183L (p54, j13L)	Structural protein p54	[14]	98.4	91.4
EP153R	Lectin-like protein	[14]	84.3	79.5
EP364R	Predicted nuclease and potential DEATH domain	[14]	95.5	97.1
EP402R (CD2v)	CD2-like protein	[14]	76	96.2
I10L	Unknown	[14]	100	97.6
I10L_2	Unknown	[14]	61.8	96
I12R	Unknown	[14]	88.3	78.7
I177L (k14L)	Putative signaling peptide	[14]	90.1	100
I196L (k15L)	Putative signaling peptide	[14]	79.4	94.9
I8L	Unknown	[14]	62.1	100
I9R	Unknown	[14]	97.9	99
KP177R	Structural protein p22	[14]	90.9	98.8
L60L	Unknown	[14]	52.1	74.4
O61R (p12)	Structural protein p12	[14]	98.4	96.8
QP383R (j11R)	NifS-like PLP-dependent transferase	[14]	90.3	99.7
X69R	Putative signal peptide	[14]	95.8	84.9
MGF 110-11L	Unknown	[14]	76.1	92.1
MGF 110-13L-14L	Unknown	[14]	96.7	95.3
MGF 110-2L	Unknown	[14]	83.7	95.6
MGF 110-5L	Unknown	[14]	98.4	(-)
MGF 110-6L	Unknown	[14]	65.3	95.1
MGF 300-2R	Unknown	[14]	50.6	100
MGF 300-4L	Unknown	[14]	54.4	96.4
MGF 360-13L	Virus replication, type I IFN Inhibitors	[3, 26]	74.8	99.2
MGF 360-18R	Virus replication, type I IFN Inhibitors	[3, 26]	82.5	97.7
MGF 360-6L	Virus replication, type I IFN Inhibitors	[3, 26]	85.5	94.9
MGF 360-8L	Virus replication, type I IFN Inhibitors	[3, 26]	78.7	91.1
MGF 505-1R	Virus replication, type I IFN Inhibitors	[3, 26]	72.5	98.1
MGF 505-4R	Virus replication, type I IFN Inhibitors	[3, 26]	100	99.2

(–), ORF not present

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ISSN: 1743-422X

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