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Table 2 Abundance of viruses and housekeeping genes, cytochrome c oxidase subunit I (cox1), ribosomal protein L18 (rpl18) and translation elongation factor 1 (eif1-beta), expressed in percentage of viral reads per total number of reads in each library

From: Ever-increasing viral diversity associated with the red imported fire ant Solenopsis invicta (Formicidae: Hymenoptera)

Sample

SRA access #

Virus abundance (%)*

Housekeeping genes (%)

 

SINV-14

SINV-15

SINV-16

SINV-17

SINaDNV

cox1

rpl18

eif1-beta

RNA1

RNA2

RNA3

RNA4

Total&

A

SRX3035962

0.008

0.516

0.128

0.002

0.3910

0.0238

0.0163

B

SRX3035961

0.047

0.019

0.042

0.072

0.180

0.013

0.327

0.235

0.7102

0.0263

0.0267

C

SRX3035960

0.046

0.005

0.051

0.048

0.150

0.019

0.120

0.281

0.002

0.4324

0.0246

0.0305

X

SRX3035959

0.009

0.2860

0.0161

0.0080

Y

SRX3035964

0.023

0.3236

0.0153

0.0089

Z

SRX3035963

0.374

0.032

0.131

0.089

0.626

0.039

0.2687

0.0135

0.0090

Q2

DRX037806

1.469

0.055

0.240

0.944

2.708

0.211

1.0036

0.0530

0.0469

W2

DRX037809

1.679

0.006

0.088

0.601

2.374

0.020

2.1720

0.0342

0.0113

W3

DRX037810

1.658

0.006

0.089

0.619

2.372

0.020

1.6576

0.0351

0.0117

Y05

SRX5464977

6.803

0.941

0.650

0.001

8.394

0.4903

0.0119

0.0048

K05

SRX5464984

0.4957

0.0141

0.0046

CA01

SRX5464990

0.4639

0.0158

0.0064

2-Small

SRX5822389

0.084

0.009

0.017

0.019

0.130

0.9619

0.0712

0.0340

  1. *Viruses with abundance equal or higher than those shown by at least one of the housekeeping genes are highlighted in bold and those with complete or nearly-complete genomes are underlined
  2. &Total: means all segments together