Table 3 Molecular genotyping techniques and associated factors for HPV infection
References | Year of publication | Molecular technique used for genotyping | Associated factors | Quality assessment score |
|---|---|---|---|---|
Veldhuijzen et al. [36] | 2011 | Linear Array HPV Genotyping Test (LA) | Â | 84.6% |
Sinayobye et al. [37] | 2014 | careHPV | Lower CD4 count < 200, history of 3 or more sexual partners, and history of using hormonal contraception | 87.5% |
Rocha-Brischiliari et al. [38] | 2014 | Genotyping using PCR-restriction fragment length polymorphism analysis | Hormonal contraceptive use and current smoker | 100% |
Bollen et al. [43] | 2006 | Reverse line-blot hybridization | Higher HIV-plasma viral load | 87.5% |
McDonald et al. [44] | 2014 | Prototype polymerase chain reaction (PCR)-based line blot assay and PCR-based, LinearArrayHPVTypingAssay | Â | 83.3% |
Firnhaber et al. [45] | 2010 | Linear Array genotyping assay (Roche) | Â | 87.5% |
Firnhaber et al. [46] | 2009 | Roche Linear Array HPV genotyping test | Â | 91.7% |
Nweke et al. [41] | 2013 | HPV GenoArray test kits | Â | 75.0% |
Denny et al. [47] | 2008 | Roche Linear Array HPV genotyping test | Low CD4 count and high viral load | 83.3% |
Akarolo-Anthony et al. [42] | 2013 | Roche Linear Array HPV Genotyping Test | Â | 87.5% |
Sahasrabuddhe et al. [48] | 2007 | Roche Linear Arrays HPV genotyping test | HRHPV associated with low CD4 count < 200 | 75.0% |
Rousseau et al. [49] | 2006 | INNO-LiPA HPV Genotyping v2 test | High prevalence of HPV on HIV infection | 87.5% |
Helen [52] | 2017 | INNO-LiPA HPV genotyping Extra® assay | Injectable contraceptive and VL > 1000 | 91.7% |
Hawes et al. [23] | 2003 | PCR -based molecular tests | High VL and low CD4 count | 87.5% |
Mattos et al. [39] | 2011 | Restriction Fragment Length Polymorphism | Â | 75.0% |
Nicol et al. [40] | 2013 | VLPs-based ELISA | Â | 62.5% |
Sagna et al. [35] | 2010 | PCR -based molecular tests | Â | Only abstract |
Munoz et al. [51] | 2013 | PCR-based molecular tests | Â | 87.5% |
Camargo et al. [50] | 2014 | PCR-based molecular tests | CD4 < 500 and high VL have association with HPV detection | 100% |