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Table 2 Sequence similarity and Bayesian Markov chain Monte Carlo analysis of LNVs

From: Origin and evolution of emerging Liao ning Virus (genus Seadornavirus, family Reoviridae)

Genotypes Nucleotide similarity Amino acid similarity tMRCA y (95% HPD) Substitution rate s/s/y (95% HPD)
Over all Each group Over all Each group Over all Each group Over all
1 70.4% ~ 100% (μ = 92.6%) 87.5% ~ 100% (μ = 94.3%) 75.0% ~ 100% (μ = 94.6%) 91.2% ~ 100% (μ = 96.4%) 272.6 (58.9,790.3) 73.0 (28.9,193.0) 1.6 × 10−3 (2.8 × 10−4,3.3 × 10−3)
2 92.5% ~ 100% (μ = 97.8%) 92.5% ~ 100% (μ = 98.9%) 46.5 (18.8,113.5)
3 97.5% ~ 100% (μ = 99.2%) 98.1% ~ 100% (μ = 99.4%) 25.3 (17.4,46.6)
  1. Note: μ average nucleotide (amino acid) similarity, y years; s/s/y Substitutions per site per year