Table 2 Sequence similarity and Bayesian Markov chain Monte Carlo analysis of LNVs
From: Origin and evolution of emerging Liao ning Virus (genus Seadornavirus, family Reoviridae)
Genotypes | Nucleotide similarity | Amino acid similarity | tMRCA y (95% HPD) | Substitution rate s/s/y (95% HPD) | |||
|---|---|---|---|---|---|---|---|
Over all | Each group | Over all | Each group | Over all | Each group | Over all | |
1 | 70.4% ~ 100% (μ = 92.6%) | 87.5% ~ 100% (μ = 94.3%) | 75.0% ~ 100% (μ = 94.6%) | 91.2% ~ 100% (μ = 96.4%) | 272.6 (58.9,790.3) | 73.0 (28.9,193.0) | 1.6 × 10−3 (2.8 × 10−4,3.3 × 10−3) |
2 | 92.5% ~ 100% (μ = 97.8%) | 92.5% ~ 100% (μ = 98.9%) | 46.5 (18.8,113.5) | ||||
3 | 97.5% ~ 100% (μ = 99.2%) | 98.1% ~ 100% (μ = 99.4%) | 25.3 (17.4,46.6) | ||||