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Table 2 Nucleotide identities of the highest homologs in GenBank database with the H6 subtype AIVs isolated in this study

From: Co-circulation of multiple reassortant H6 subtype avian influenza viruses in wild birds in eastern China, 2016–2017

VirusGeneClosest relativeIdentity
A/shoveller duck/Shanghai/PD1026–10/2016(H6N1)PB2A/duck/Mongolia/777/2015(H3N8)98.8%
 PB1A/Duck/Dongting/D76–1/2016(H5N7)99.4%
 PAA/Duck/Dongting/D76–1/2016(H5N7)99.5%
 HAA/duck/Bangladesh/31227/2016(H6N2)99.3%
 NPA/Duck/Dongting/D76–1/2016(H5N7)99.7%
 NAA/wild bird/Wuhan/WHHN16/2014(H1N1)99.3%
 MA/duck/Bangladesh/31227/2016(H6N2)99.8%
 NSA/Pigeon/Longquan/LQ67/2016(H2N8)99.3%
A/shoveller duck/Shanghai/JDS1108–37/2017(H6N1)PB2A/duck/Mongolia/520/2015(H1N1)98.4%
 PB1A/duck/Mongolia/520/2015(H1N1)99.2%
 PAA/duck/Fujian/SD013/2017(H6N6)99.0%
 HAA/duck/Ganzhou/GZ151/2016(H6N6)98.8%
 NPA/duck/Mongolia/709/2015(H10N7)98.5%
 NAA/wild bird/Wuhan/WHHN16/2014(H1N1)98.0%
 MA/duck/Guangdong/S4251/2010(H6N6)98.7%
 NSA/duck/Hubei/ZYSYG8/2015(H6N2)98.3%
A/mandarin duck/Shanghai/PD1018–15/2017(H6N2)PB2A/duck/Vietnam/LBM798/2014(H3N6)98.6%
 PB1A/Duck/Dongting/D76–1/2016(H5N7)99.3%
 PAA/common porchard/Yamaguchi/3501B002/2017(H5N6)98.5%
 HAA/duck/Yamagata/061004/2014(H6N6)98.3%
 NPA/duck/Hokkaido/166/2014(H5N2)99.0%
 NAA/black-necked crane/Zhaotong/ZT-12/2013(H1N2)98.7%
 MA/duck/Hokkaido/W280/2014(H5N3)98.8%
 NSA/Anser fabalis/China/Anhui/S39/2014(H6N2)99.0%
A/commol teal/Shanghai/PD1027–12/2017(H6N2)PB2A/duck/Vietnam/LBM798/2014(H3N6)98.8%
 PB1A/Duck/Dongting/D76–1/2016(H5N7)99.2%
 PAA/common porchard/Yamaguchi/3501B002/2017(H5N6)98.3%
 HAA/duck/Yamagata/061004/2014(H6N6)98.1%
 NPA/duck/Hokkaido/166/2014(H5N2)99.0%
 NAA/black-necked crane/Zhaotong/ZT-12/2013(H1N2)98.6%
 MA/duck/Hokkaido/W280/2014(H5N3)98.8%
 NSA/Anser fabalis/China/Anhui/S39/2014(H6N2)99.0%
A/shoveller duck/Shanghai/PD1018–32/2017(H6N5)PB2A/duck/Mongolia/154/2015(H1N2)98.8%
 PB1A/Duck/Dongting/D76–1/2016(H5N7)99.5%
 PAA/common porchard/Yamaguchi/3501B002/2017(H5N6)98.9%
 HAA/duck/Bangladesh/31227/2016(H6N2)99.1%
 NPA/wildwater fowl/Hong Kong/MPL1006/2011(H7N7)99.2%
 NAA/migratory duck/Jiangxi/30246/2013(H10N5)98.5%
 MA/hooded crane/Korea/1176/2016(H1N1)99.3%
 NSA/duck/Jiangxi/22960/2008(H10N8)99.4%
A/commol teal/Shanghai/PD1026–12/2016(H6N8)PB2A/duck/Hokkaido/103/2014(H3N8)99.4%
 PB1A/duck/Hokkaido/103/2014(H3N8)98.8%
 PAA/duck/Hokkaido/207/2014(H8N2)99.2%
 HAA/wild bird/Jiangxi/P419/2016(H6N8)98.0%
 NPA/duck/Hokkaido/103/2014(H3N8)99.6%
 NAA/duck/Hokkaido/91/2014(H3N8)99.4%
 MA/duck/Hokkaido/91/2014(H3N8)100.0%
 NSA/northern pintail/Alaska/496/2012(H3N8)99.9%
A/commol teal/Shanghai/PD1026–19/2016(H6N8)PB2A/duck/Hokkaido/W9/2015(H1N1)98.9%
 PB1A/Duck/Dongting/D76–1/2016(H5N7)99.5%
 PAA/Duck/Dongting/D76–1/2016(H5N7)99.3%
 HAA/duck/Guangdong/G1345/2014(H6N6)98.3%
 NPA/duck/Ganzhou/GZ5/2015(H4N6)99.2%
 NAA/duck/Mongolia/487/2011(H3N8)98.4%
 MA/duck/Hubei/ZYSYF8/2015(H6N6)98.8%
 NSA/duck/Hubei/ZYSYG8/2015(H6N2)99.3%
A/commol teal/Shanghai/PD1109–24/2016(H6N8)PB2A/duck/Hokkaido/W9/2015(H1N1)98.9%
 PB1A/Duck/Dongting/D76–1/2016(H5N7)99.4%
 PAA/Anseriformes/Anhui/L167/2014(H1N1)98.8%
 HAA/duck/Guangdong/G1345/2014(H6N6)98.3%
 NPA/duck/Ganzhou/GZ5/2015(H4N6)99.3%
 NAA/duck/Mongolia/487/2011(H3N8)98.2%
 MA/duck/Hubei/ZYSYF8/2015(H6N6)98.6%
 NSA/duck/Bangladesh/24706/2015(H7N1)99.3%
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