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Table 3 Genome segment sizes and nucleotide sequence identities rotaviruses A, D and F derived from chicken with viral enteritis

From: Viral metagenomic analysis of chickens with runting-stunting syndrome in the Republic of Korea

ProteinRotavirus ARotavirus DRotavirus F
Size in nucleotides (% nt identitya)Geno-typeSize in nucleotides (% nt identity)Size in nucleotides (% nt identity)
02V0002G313D6207D1105 V004913D6207D1103 V056813D6207D11
VP133053253 (91.6)R632743154 (90.2)430 (90.2)32963247 (89.6)305 (87.6)
VP227322676 (94.1)829 (94.8)C628012460 (90.0)806 (91.7)27692382 (89.8)
VP325832517 (91.7)M723662279 (81.5)1520 (82.9)22462075 (72.6)
VP423542251 (74.9)P3121041990 (95.5)1094 (88.3)21741848 (91.7)
NSP121221693 (91.2)266 (92.2)A1618721676 (95.5)590 (96.9)17911657 (87.8)
VP61348434 (96.3)I1113531265 (96.4)343 (96.2)13141250 (91.5)
NSP310891049 (90.2)T812421110 (88.1)570 (87.8)13091197 (81.8)
NSP21042675 (94.8)N61026773 (87.7)567 (90.5)1068598 (90.7)
VP710661033 (94.4)G191025995 (86.6)326 (88.7)990876 (76.5)
NSP4724251 (93.6)E10765466 (93.1)442 (92.8)706581 (86.1)433 (89.4)
NSP5699272 (94.1)H8672549 (79.5)678309 (87.1)
  1. asimilarity of nucleotide (nt) compared to rotavirus A strain 02V0002G3, rotavirus D strain 05 V0049 and rotavirus F strain 03 V0568