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Table 3 Percent similarities of Pak aHEV sequences with Orthohepevirus A sequences based on partial ORF1 (MeT, Hel), ORF2 and complete ORF3 nucleotide sequences

From: A novel avian isolate of hepatitis E virus from Pakistan

mHEV strains

Genotype/ country (GenBank accession no.)

% nucleotide similarity

MeT

Hel

ORF2

ORF3

Pak aHEV (PT12B)

 Gt1/China (D11092)

57

66a

46

42

 Gt1/Pakistan (M80581)

55

66

49

42

 Gt1/Burma (M73218)

58

64

48

42

 Gt3/USA (AF082843)

56

61

48

41

 Gt3/China (FJ527832)

55

61

46

42

 Gt4/China (AJ272108)

55

60

47

45

 Gt4/Korea (FJ763142)

58

61

47

43

 Gt2/Mexico (M74506)

59

65

47

42

Pak aHEV (PT16B)

 Gt1/China (D11092)

56

66

47

42

 Gt1/Pakistan (M80581)

55

66

50

42

 Gt1/Burma (M73218)

57

64

48

42

 Gt3/USA (AF082843)

55

61

48

41

 Gt3/China (FJ527832)

55

61

46

42

 Gt4/China (AJ272108)

55

60

47

45

 Gt4/Korea (FJ763142)

58

61

47

43

 Gt2/Mexico (M74506)

58

65

47

42

  1. aBolded numbers show the highest sequence identity to the Pak aHEV sequences. Korea, Republic of Korea