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Table 3 Site-specific tests for positive selection on HPV6 E6

From: E6 and E7 gene polymorphisms in human papillomavirus Type-6 identified in Southwest China

Models

InL

Estimates of parameters

2Δl

Positively selected sites

M7

− 662.94

p = 12.39037 q = 99.00000

 

NA

M8

−662.94

p0 = 0.99999 p = 12.38952 q = 99.00000

(p1 = 0.00001) w = 1.00000

0 P = 1

NONE

  1. Note: lnL, the log-likelihood difference between the two models. 2∆l, twice the log-likelihood difference between the two models (P < 0.05 was considered statistically significant). NA means not applicable. M7 means specifies the model of nucleotide substitution (REV); M8 means specifies the model of nucleotide substitution (UNREST)
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Virology Journal

ISSN: 1743-422X