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Table 2 Primers used for construction of D51 infectious clone

From: A novel method to rescue and culture duck Astrovirus type 1 in vitro

Primer

Sequences(5′-3′)

HeadRiboF1

TTGGCGCGCCACATCATCTGATGAGTCCGTGAGGACGAAACGGTACCCG (Asc I)

HeadRiboF2

CGTGAGGACGAAACGGTACCCGGTACCGTCATCCGAAGTGGGCGAGTCGGGGCCATGGC

F1-R

CCAGGTGTCAACAATCATGC

Long-7R

CCAGAACATTGTCTTTATTCCCTGTAATCTGTCCAAGTGTGACCACTGTTGTC

Long-8F

AGGTGCAGGGTCCCCCTGTCAATGATAAAATGACAACAGTGGTCACACTTGGA

aR

CGCGGATCCTTTGGATACGCTGGTGTTG (BamH I)

bF

CAGAGAATGCTTGATGAAGGC

bR

CGCGGATCCGTTGAAAACTGCCCTGAAGG (BamH I)

cF

CTTGGACTGTGGAAGCATATACC

cR

CGCGGATCCTCATGTGTGGTGTATACTGTGATG (BamH I)

dF

GACAACAGTGGTCACACTTGGA

F12-F

ACAGCTGCACTTTCTCATGC

HpaR1

CCGCTCGAGGTCCCATTCGCCATTACCGAGGGGACGGTCCCCTCGGAATGTTGCCCAGCCG (Xho I)

HpaR2

CGGAATGTTGCCCAGCCGGCGCCAGCGAGGAGGCTGGGACCATGCCGGCCTTTT

HpaR3

GGACCATGCCGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGCCAATTGAA

Marker1

AGCTGGATGTCTGTATTTCGGTTCAACAGCCTCCAGATCTCTCAACAGCGCAC (Bgl II)

Marker2

GCTGTTGTGGTGAAGATCAGTGGTGCGCTGTTGAGAGATCTGGAGGCTGTTGAACC (Bgl II)

  1. Underlined nucleotides represented the restriction sites