Skip to main content

Table 2 Nucleotide and amino acid distances (distances ± SE) of BLV env gene between Chinese strains and the reference strains

From: Molecular characterization of bovine leukemia virus reveals existence of genotype 4 in Chinese dairy cattle

 

CHN_G4

CHN_G6

G1

G2

G3

G4

G5

G6

G7

G8

G9

G10

CHN_G4

0.003±0.001

0.023±0.006

0.027±0.007

0.029±0.007

0.022±0.007

0.012±0.003

0.037±0.008

0.023±0.006

0.021±0.006

0.024±0.007

0.020±0.006

0.026±0.007

0.008±0.004

CHN_G6

0.034±0.005

0.004±0.001

0.026±0.007

0.029±0.007

0.022±0.007

0.020±0.006

0.037±0.008

0.008±0.003

0.021±0.006

0.019±0.006

0.020±0.006

0.022±0.007

0.002±0.002

G1

0.032±0.004

0.038±0.005

0.013±0.002

0.024±0.005

0.016±0.005

0.026±0.006

0.039±0.008

0.027±0.007

0.024±0.006

0.017±0.005

0.015±0.004

0.032±0.008

0.012±0.003

G2

0.030±0.004

0.041±0.005

0.028±0.004

0.011±0.002

0.013±0.004

0.028±0.006

0.042±0.008

0.028±0.007

0.025±0.006

0.020±0.005

0.017±0.004

0.034±0.007

0.020±0.005

G3

0.029±0.004

0.037±0.005

0.026±0.004

0.023±0.004

0.005±0.001

0.021±0.006

0.035±0.008

0.022±0.007

0.019±0.006

0.013±0.005

0.007±0.004

0.027±0.008

0.001±0.001

G4

0.014±0.002

0.034±0.005

0.034±0.004

0.033±0.004

0.031±0.005

0.014±0.002

0.034±0.007

0.020±0.005

0.019±0.005

0.023±0.006

0.019±0.006

0.024±0.006

0.011±0.003

G5

0.038±0.005

0.046±0.005

0.042±0.005

0.045±0.005

0.044±0.005

0.038±0.004

0.020±0.003

0.036±0.007

0.034±0.007

0.037±0.008

0.034±0.008

0.042±0.008

0.021±0.005

G6

0.037±0.005

0.020±0.003

0.042±0.005

0.043±0.005

0.038±0.005

0.036±0.005

0.047±0.005

0.017±0.003

0.019±0.005

0.019±0.006

0.020±0.006

0.023±0.007

0.008±0.003

G7

0.029±0.004

0.040±0.006

0.037±0.005

0.037±0.005

0.035±0.005

0.029±0.004

0.044±0.005

0.042±0.005

0.009±0.002

0.021±0.006

0.017±0.006

0.026±0.007

0.010±0.004

G8

0.030±0.004

0.035±0.005

0.026±0.004

0.028±0.004

0.024±0.004

0.032±0.004

0.045±0.005

0.037±0.005

0.037±0.005

0.011±0.003

0.011±0.004

0.029±0.008

0.005±0.003

G9

0.028±0.004

0.034±0.005

0.025±0.004

0.023±0.004

0.019±0.004

0.030±0.004

0.042±0.005

0.038±0.005

0.034±0.005

0.021±0.004

0.001±0.001

0.025±0.007

0.002±0.002

G10

0.031±0.005

0.029±0.005

0.039±0.005

0.040±0.005

0.036±0.005

0.032±0.004

0.044±0.005

0.031±0.004

0.036±0.005

0.037±0.005

0.033±0.005

0.005±0.002

0.007±0.003

  1. aLeft lower diagonal: nucleotide distance among (inter-genotype) BLV genotypes and Chinese strains
  2. bRight upper diagonal: amino acid distance among (inter-genotype) BLV genotypes and Chinese strains
  3. cdThe values in bold along the diagonal are the distance (intra-genotype) of the nucleotides (above) and amino acids (below) between the Chinese strains and those in GenBank