Skip to main content

Table 1 Nucleotide sequence identities of rotavirus A strain PG2/2018 compared with the most closely related rotavirus A strains

From: First detection of a reassortant G3P[8] rotavirus A strain in Italy: a case report in an 8-year-old child

Gene

GenBank

Accession no.

Most closely related genotype

(strain)

Nucleotide sequence lenght

(position)

Nucleotide sequence identity (%)

VP7

MK158256

G3 (RVA/Human-wt/BRA/IAL-R608/2015/G3P[8])

835 bp (nt 48–882)

99.8

VP4

MK158257

P[8] (RVA/Human-wt/BRA/IAL-R608/2015/G3P[8])

614 bp (nt 186–797)

99.8

VP6

MK780099

I2 (RVA/Human-wt/BRA/IAL-R608/2015/G3P[8])

553 bp (nt 792–1344)

98.5

VP1

MK780096

R2 (RVA/Human-wt/BRA/IAL-R751/2015/G3P[8])

909 bp (nt 28–936)

99.1

VP2

MK780097

C2 (RVA/Human-wt/BRA/IAL-R751/2015/G3P[8])

807 bp (nt 26–832)

99.4

VP3

MK780098

M2 (RVA/Human-wt/BRA/IAL-R751/2015/G3P[8])

877 bp (nt 19–895)

99.3

NSP1

MK780100

A2 (RVA/Human-wt/BRA/IAL-R608/2015/G3P[8])

858 bp (nt 21–878)

99.5

NSP2

MK780101

N2 (RVA/Human-wt/BRA/IAL-R608/2015/G3P[8])

980 bp (nt 35–1014)

99.6

NSP3

MK780102

T2 (RVA/Human-wt/BRA/IAL-R608/2015/G3P[8])

990 bp (nt 40–1029)

99.5

NSP4

MK780103

E2 (RVA/Human-wt/BRA/IAL-R608/2015/G3P[8])

694 bp (nt 49–742)

99.4

NSP5

MK780104

H2 (RVA/Human-wt/BRA/IAL-R608/2015/G3P[8])

764 bp (nt 37–799)

99.6