Skip to main content

Advertisement

Table 4 Non-synonymous and synonymous substitution in ORFs of S5, S7 and S9

From: Close evolutionary relationship between rice black-streaked dwarf virus and southern rice black-streaked dwarf virus based on analysis of their bicistronic RNAs

  ORFs dN dS dN/ dS   ORFs dN dS dN/ dS
RBSDV ORF5–1 0.013 ± 0.002 0.105 ± 0.008 0.124 SRBSDV ORF5–1 0.006 ± 0.001 0.021 ± 0.003 0.286
ORF5–2 0.015 ± 0.004 0.053 ± 0.012 0.283 ORF5–2 0.005 ± 0.002 0.012 ± 0.006 0.417
ORF7–1 0.002 ± 0.001 0.071 ± 0.009 0.028 ORF7–1 0.001 ± 0.001 0.009 ± 0.004 0.111
ORF7–2 0.010 ± 0.002 0.089 ± 0.013 0.112 ORF7–2 0.001 ± 0.001 0.012 ± 0.006 0.083
ORF9–1 0.033 ± 0.004 0.259 ± 0.028 0.127 ORF9–1 0.008 ± 0.002 0.014 ± 0.003 0.571
ORF9–2 0.032 ± 0.012 0.348 ± 0.101 0.092 ORF9–2 0.090 ± 0.011 0.193 ± 0.049 0.466
Maize ORF5–1 0.002 ± 0.001 0.025 ± 0.006 0.08 Rice ORF5–1 0.605 ± 0.067 1.039 ± 0.135 0.582
ORF5–2 0.004 ± 0.003 0.028 ± 0.015 0.143 ORF5–2 1.289 ± 0.391 1.363 ± 0.362 0.946
ORF7–1 0.001 ± 0.001 0.023 ± 0.007 0.043 ORF7–1 0.085 ± 0.012 0.772 ± 0.140 0.110
ORF7–2 0.003 ± 0.002 0.003 ± 0.011 1.0 ORF7–2 0.168 ± 0.055 0.994 ± 0.316 0.169
ORF9–1 0.101 ± 0.010 0.763 ± 0.113 0.132 ORF9–1 0.091 ± 0.010 0.683 ± 0093 0.133
ORF9–2 0.102 ± 0.046 1.081 ± 0.394 0.094 ORF9–2 0.122 ± 0.030 0.980 ± 0.280 0.124