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Table 2 Papillomavirus genome size, GC content, and gene and protein sequence identities

From: Detection and genome characterization of two novel papillomaviruses and a novel polyomavirus in tree shrew (Tupaia belangeri chinensis) in China

Papillomavirus GenBank number Genome size(nt) G + C content (%) pairwise identities of nucleotide and amino acid sequence(nt/aa%)
Tupaia belangeri chinensis papillomavirus 1 Tupaia belangeri chinensis papillomavirus 2
L1 L2 E1 E2 E4 E6 E7 L1 L2 E1 E2 E6 E7
TbelPV1 MK443496 7410 48.3 / / / / / / / / / / / / /
TbelPV2 MK443497 7568 54.3 58/54 49/35 56/45 45/31 / 42/27 50/36 / / / / / /
Alphapapillomavirus
 Human papillomavirus 2 NC_001352 7860 48.4 55/48 32/28 46/41 39/30 32/13 37/26 39/27 53/50 31/27 47/39 35/25 35/22 39/35
 Human papillomavirus 18 NC_001357 7857 40.4 52/46 35/27 46/37 41/31 23/12 36/26 40/31 52/48 33/27 45/36 32/24 29/18 40/31
 Rhesus monkey papillomavirus NC_001678 8028 48.0 54/48 33/25 49/41 40/30 29/24 37/31 54/49 34/25 49/39 33/26 29/26 40/34
Betapapillomavirus
 Human papillomoavirus type 5 NC_001531 7746 42.4 53/49 40/35 52/44 38/29 19/8 34/25 38/35 53/50 38/35 50/44 33/23 36/27 36/36
Chipapillomavirus
 Canine papillomavirus 3 NC_008297 7801 51.5 55/50 35/31 51/44 38/27 35/24 40/29 57/56 36/30 52/44 38/26 37/22 42/32
 Canine papillomavirus 4 NC_010226 7742 53.3 54/52 35/30 50/43 38/29 33/24 41/29 56/54 35/30 50/44 37/28 39/27 43/35
Deltapapillomavirus
 Bos grunniens papillomavirus type 1 JX174437 7946 44.4 54/48 30/24 47/38 39/27 34/8 28/18 27/19 52/48 28/22 46/39 32/23 32/18 31/19
Dyodeltapapillomavirus
Ursus maritimus papillomavirus 1 NC_010739 7582 48.4 56/54 31/26 51/44 39/26 39/27 59/54 32/26 50/42 37/26 39/28
 Feline papillomavirus type 2 EU796884 7899 53.0 55/54 35/27 51/44 34/23 38/27 40/34 57/58 36/29 52/47 36/25 38/28 44/32
Dyomupapillomavirus
 Morelia spilota papillomavirus 1 HQ262535 7048 40.9 54/50 31/26 51/43 44/33 34/14 29/21 33/25 53/54 30/25 48/44 36/27 32/26 34/24
Dyorhopapillomavirus
 Equine papillomavirus 2 NC_012123 7802 56.1 56/49 32/27 39/49 38/28 25/15 33/19 54/49 31/27 40/48 36/26 26/23 35/22
Gammapapillomavirus
 Human papillomavirus type 4 NC_001457 7353 38.5 53/48 33/25 51/43 43/36 41/17 37/25 37/23 52/53 34/29 48/42 36/27 36/26 36/23
Iotapapillomavirus
Mastomys natalensis papillomavirus NC_001605 7687 50.2 55/53 36/31 50/44 32/25 33/24 37/24 58/59 33/38 50/48 34/29 39/32 33/29
Kappapapillomavirus
 Cottontail rabbit papillomavirus NC_001541 7868 46.4 58/56 32/26 49/44 44/36 44/12 23/12 39/31 54/51 32/28 49/43 35/29 21/10 37/28
 Rabbit oral papillomavirus NC_002232 7565 44.4 59/57 34/31 49/44 43/37 38/10 22/22 43/34 54/53 36/30 48/42 34/29 24/23 42/29
Lambdapapillomavirus
 Crocuta crocutapapillomavirus 1 NC_018575 8344 38.4 55/54 36/34 52/43 45/31 34/14 29/20 40/26 52/50 32/27 48/41 35/25 34/25 38/33
Procyon lotor papillomavirus 1 NC_007150 8170 45.9 59/59 38/37 52/46 45/38 39/15 32/20 38/26 55/53 36/30 52/46 36/28 33/25 38/38
 Puma concolor papillomavirus type 1 AY904723 8321 47.2 56/55 39/37 53/47 44/31 32/21 39/23 35/26 54/50 37/31 51/44 37/27 38/27 37/30
Mupapillomavirus
 Human papillomavirus 1 NC_001356 7815 40.3 56/55 39/37 51/45 42/32 41/27 41/27 55/54 36/31 49/45 35/28 37/28 42/37
 Human papillomavirus type 63 NC_001458 7348 40.4 60/59 38/36 51/44 44/34 34/12 39/29 36/28 55/56 35/32 49/43 36/26 36/25 41/34
Zetapapillomavirus
 Equus caballus papillomavirus type 1 NC_003748 7610 53.0 53/50 32/26 50/41 43/34 28/10 27/21 39/26 54/52 32/24 51/48 37/28 33/23 39/32