Primers | Sequences | Nucleotide no.a |
---|---|---|
VHSV-DK genome primers | ||
 VHSV 1F | GTATCATAAAAGATGATGAGT | 1–21 |
 VHSV 1R | CAGCTTGAACTTCTTCATGGC | 2007–1987 |
 VHSV 2F | AAGAAGACCGACAACATACTCT | 1837–1858 |
 VHSV 2R | GACGAAACTTTGAGAGGAGAAA | 3971–3950 |
 VHSV 3F | ATCTCATCACCAACATGGCTCAAA | 3870–3893 |
 VHSV 3R | TTGTTCGCCTCTCCCCTAATTGT | 5926–5888 |
 VHSV 4F | CCGCTATTGACTTGCTCAAATTG | 5789–5812 |
 VHSV 4R | CTGATCCATGGTGGCTATGTGAT | 8020–7998 |
 VHSV 5F | AGATGATTGTCTCCACCATGAA | 7824–7845 |
 VHSV 5R | GAGATCCGCTCTCGTTCATCAA | 10,005–9984 |
 VHSV 6F | GACAAGAAAGCTGGGAAGAGA | 9765–9785 |
 VHSV 6R | GTATAGAAAATAATACATACCA | 11,159–11,138 |
 VHSV 1MF | GGACAAGATGATCAAGTACATC | 595–616 |
 VHSV 2MF | CCATTCTCTGCGAAGATCAACA | 2435–2456 |
 VHSV 3MF | GATAAAGAAACATGGCGACCCA | 4547–4568 |
 VSHV 4MF | GGATCATCAGGAAGAGACACCA | 6392–6413 |
 VHSV 5MF | AGGCACACCACTTCACCATCCA | 8412–8433 |
 VHSV-DK 5.3R | CCTTGGATTCTTGTTGAGTCA | 5280–5260 |
Mutagenesis primers | ||
 VHSV-DK PmlF | TTGTGTATACAACACGTGAGACCCACAATG |  |
 VHSV-DK PmlR | CATTCCATTGTGGGTCTCACGTGTTGTATACACAA |  |
 VHSV SacIIF | GTCTGAACACACCGCGGCGAATGACCACAATTCC |  |
 VHSV SacIIR | GGAATTGTGGTCATTCGCCGCGGTGTGTTCAGA |  |
 VHSV NheF | CCTCAGACAAGCTAGCACAAAAAAC |  |
 VHSV NheR | GTTTTTTGTGCTAGCTTGTCTGAGG |  |