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Table 2 Pairwise sequence identity of nucleotide and amino acid between the six unique CP sequences

From: Functional analysis of apple stem pitting virus coat protein variants

Name HB-HN1–3 HB-HN6–8 HB-HN7–18 HN-HN9–3 LN-AP1–1 YN-MRS-17
HB-HN1–3 100% 85.5%a 88.8% 81.7% 83.8% 86.6%
HB-HN6–8 80.9%b 100% 87.1% 78.2% 81.8% 88.5%
HB-HN7–18 87.8% 80.4% 100% 82.7% 83.0% 88.7%
HN-HN9–3 74.9% 72.5% 74.9% 100% 81.5% 83.1%
LN-AP1–1 74.9% 78.9% 78.8% 74.2% 100% 83.7%
YN-MRS-17 80.9% 86.2% 81.1% 76.2% 80.6% 100%
  1. alower left and b upper right represent nucleotide and amino acid similarity between each pair of clones, respectively