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Table 2 Pathogenesis-related proteins identified after MS/MS analysis

From: Contribution of Tomato torrado virus Vp26 coat protein subunit to systemic necrosis induction and virus infectivity in Solanum lycopersicum

ID Name Theoretical MW [Da] Sequence coverage [%] Peptides matched Score rank
gi|19,315 pathogenesis-related protein PR P23 [Sl] 26,024 40 R.NNCPYTVWAASTPIGGGR.R R.GQTWVINAPR.G R.TNCNFDGAGR.G K.CHAIHCTANINGECPGSLR.V R.VPGGCNNPCTTFGGQQYCCTQGPCGPTDLSR.F R.CPDAYSYPQDDPTSTFTCPSGSTNYR.V 322/441
gi|7,414,370 pathogenesis-related protein (PR-5 protein) [Sl] 28,437 25 R.GQSWWFWAPPGTK.M R.TNCNFDGAGR.G R.GWCQTGDCGGVLDCK.G R.CPDAYSYPQDDPTSTFTCQSWTTDYK.I K.CHPIQCTANINGECPGSLR.V 299/334/383
gi|460,404,652 pathogenesis-related protein STH-2-like [Sl] 17,472 42 K.GLVLDFDSLVPK.L K.LLSHDVK.S K.SIEIVEGDGGAGSIK.Q K.QMNFVEGGPIK.Y + Oxidation (M) K.IHVIDDK.N K.IHVIDDKNLVTK.Y K.YSLIEGDVLGDK.L K.YSLIEGDVLGDKLESIAYDVK.F K.FEAAGDGGCVCK.T K.GDHVVSEEEHNVGK.G K.AIDLFK.A K.AIEAYLLANPSVYA.- 193/225/599
gi|224,802 pathogenesis-related, protein p14 [Sl] 14,589 13 R.AQVGVGPMSWDANLASR.A + Oxidation (M) 119/152/279
gi|372,995,481 pathogenesis-related protein PR-10 [Nt] 17,870 15 K.ALVLDADNLIPK.L K.LHVIDDK.N K.LHVIDDKNLVTK.Y K.YSLIEGDVLGDK.L 45/94/151
gi|4,582,642 ribonuclease T2 [Sl] 27,157 7 R.ESSLDESEFSDLISTMEK.N + Oxidation (M) 128
gi|460,400,304 pathogenesis-related protein P69G [Sl] 80,109 4 K.SSYTVQIASPK.G K.LTYQVTFSK.T R.SPIAVVLALAK.- 110
gi|51,317,936 pathogenesis-related protein 10 [Sv] 17,690 24 K.QMNFVEGGPIK.Y + Oxidation (M) K.IHVIDDK.N K.YSLIEGDVLGDK.L K.YSLIEGDVLGDKLESINYDIK.F 179
gi|460,402,446 pathogenesis-related leaf protein 4-like [Sl] 18,215 14 R.ASELWVAEKPNYNYGTNQCASGK.V 96
  1. The MS/MS analysis concerns the protein fraction characterized by induced RNase activity. Identified proteins with a score higher than 130 (represented at least twice) are shown in bold. Sl, Solanum lycopersicum; Sv, Solanum virginianum; Nt, Nicotiana tabacum