From: Analysis of the codon usage pattern of the RdRP gene of mycovirus infecting Aspergillus spp.
AA | Codon | AfuPmV-1 | AfuCV | AfuPV-1 | AA | Codon | AfuPmV-1 | AfuCV | AfuPV-1 |
---|---|---|---|---|---|---|---|---|---|
Phe | UUU | 0.21a | 0.90 | 0.79 | Ser | UCU | 0.56a | 0.71 | 1.38 |
UUC | 1.79 b | 1.10 | 1.21 | UCC | 2.89 b | 0.88 | 1.38 | ||
Leu | UUA | 0.08a | 0.67 | 0.30 | UCA | 0.44a | 1.24 | 1.54 | |
UUG | 0.46a | 1.27 | 1.20 | UCG | 0.89 | 0.35a | 0.15a | ||
CUU | 0.92 | 0.33a | 1.35 | Pro | CCU | 0.67 | 0.59a | 0.93 | |
CUC | 3.69 b | 0.20a | 1.35 | CCC | 1.92 b | 0.94 | 1.07 | ||
CUA | 0.08a | 1.73 | 0.60a | CCA | 0.67 | 1.18 | 1.20 | ||
CUG | 0.77 | 1.80 b | 1.20 | CCG | 0.75 | 1.29 | 0.80 | ||
Ile | AUU | 1.08 | 0.72 | 0.57a | Thr | ACU | 0.67 | 1.25 | 1.29 |
AUC | 1.32 | 1.03 | 1.86 b | ACC | 2.00 b | 1.10 | 1.16 | ||
AUA | 0.60a | 1.24 | 0.57a | ACA | 0.08a | 1.10 | 0.52a | ||
Val | GUU | 0.29a | 0.96 | 0.70 | ACG | 1.25 | 0.55a | 1.03 | |
GUC | 3.07 b | 0.92 | 0.35a | Ala | GCU | 0.54a | 1.39 | 0.94 | |
GUA | 0.07a | 0.92 | 0.52a | GCC | 2.43 b | 0.91 | 0.71 | ||
GUG | 0.57a | 1.20 | 2.43 b | GCA | 0.27a | 1.33 | 1.18 | ||
Tyr | UAU | 0.35a | 1.04 | 1.20 | GCG | 0.76 | 0.36a | 1.18 | |
UAC | 1.65 b | 0.96 | 0.80 | Cys | UGU | 0.67 | 1.00 | 1.33 | |
His | CAU | 0.46a | 0.76 | 1.25 | UGC | 1.33 | 1.00 | 0.67 | |
CAC | 1.54 | 1.24 | 0.75 | Arg | CGU | 0.70 | 0.64 | 2.17 b | |
Gln | CAA | 0.33a | 0.77 | 1.22 | CGC | 2.50 b | 0.72 | 0.77 | |
CAG | 1.67 b | 1.23 | 0.78 | CGA | 0.30a | 0.56a | 1.15 | ||
Asn | AAU | 0.42a | 0.83 | 0.77 | CGG | 1.30 | 1.04 | 0.51a | |
AAC | 1.58 | 1.17 | 1.23 | Ser | AGU | 0.11a | 0.88 | 0.92 | |
Lys | AAA | 0.50a | 0.71 | 0.60a | AGC | 1.11 | 1.94 b | 0.62 | |
AAG | 1.50 | 1.29 | 1.40 | Arg | AGA | 0.00a | 1.12 | 0.64 | |
Asp | GAU | 0.44a | 1.04 | 1.20 | AGG | 1.20 | 1.92 b | 0.77 | |
GAC | 1.56 | 0.96 | 0.80 | Gly | GGU | 0.81 | 1.21 | 1.40 | |
Glu | GAA | 0.35a | 0.46a | 0.74 | GGC | 1.41 | 0.97 | 1.20 | |
GAG | 1.65 b | 1.54 | 1.26 | GGA | 0.59a | 0.79 | 0.70 | ||
 |  |  |  | GGG | 1.19 | 1.03 | 0.70 |