Table 1 Putative cleavage sites of SCMV canna isolate and other isolates
From: The complete genomic sequence of Sugarcane mosaic virus from Canna spp. in China
Isolate | Canna | JN021933 | AJ278405 | AJ310102 | AM110759 |
|---|---|---|---|---|---|
Region | |||||
P1/HC-Pro | LDIEHY/S | LDIDHY/A | LEIEHY/A | FDIEHY/A | MEIEHY/A |
HC-Pro/P3 | REYIVG/G | REYIVG/G | RDYLVG/G | REYIVG/G | REYIVG/G |
P3/6 K1 | TGVIHE/G | TGVIHE/G | TGVIHE/G | TGVIHE/G | TGVIHE/G |
6 K1/CI | TPVTHQ/S | PSVAQQ/S | PPVMQQ/S | PPVVQQ/S | PPVTQQ/S |
CI/6 K2 | NTVIHQ/G | NTVIHQ/G | NTVIHQ/G | NTVIHQ/G | NTVIHQ/G |
6 K2/NIa-VPg | TDVLHQ/G | INVSHQ/G | TNVSHQ/G | TNVSHQ/G | TEVLHQ/G |
NIa-VPg/NIa-Pro | IGVTHE/A | TGVAHE/S | TGVAHE/S | AGVAHE/S | TGVAHE/S |
NIa-Pro/NIb | SSVEEQ/C | MSVEEQ/C | MIVEEQ/C | ISVEEQ/C | MSVEEQ/C |
NIb/CP | EDVVHQ/A | EEVIHQ/S | DEVFHQ/A | EDVFHQ/S | EDVFHQ/S |