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Table 1 Sequences of the JCV-LAMP primers

From: A loop-mediated isothermal amplification assay for the detection and quantification of JC polyomavirus in cerebrospinal fluid: a diagnostic and clinical management tool and technique for progressive multifocal leukoencephalopathy

Primer

Genome positiona

Sequence (5′-3′)

F3

2985–3006

CTTAGTGATTTTCTCAGGTAGG

B3

3174–3191

TGGCATAAGCAACCTTGA

FIP (F1c + F2)

3073–3095, 3022–3043

TCCACCTGGAATTGTAACCATGA-CTATTTGCCTTACAAATCTGGC

BIP (B1c + B2)

3099–3121, 3149–3171

ACCTGTGTTCTTTTGTTTTGGTG-GCCTAAGAGATTACTTAGATGGA

LF

3045–3064

TCAGTGCCTAGAACTTTACA

  1. aGenome position in the large T antigen gene of JCV MY strain (accession number: AB038250)