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Table 4 Screened DEGs of LRR-RLKs

From: Transcriptome analysis of Nicotiana benthamiana infected by Tobacco curly shoot virus

Unigene ID

Protein properties

log2FCa

qvaluea

log2FCb

qvalueb

Niben101Scf13404g00002

Brassinosteroid LRR receptor kinase-like; BRI1

  

-0.8361

0.000272

Niben101Scf07123g01015

Elicitor-inducible leucine-rich repeats receptor-like protein

  

5.5080

0.000289

Niben101Scf00104g02013

F-box/LRR-repeat protein 17-like

  

0.8664

0.021066

Niben101Scf04252g00009

F-box/LRR-repeat protein 17-like

  

1.8551

0.003213

Niben101Scf09559g00005

F-box/LRR-repeat MAX2 homolog A-like

0.8581

0.018415

  

Niben101Scf15394g00006

F-box/LRR-repeat protein 14-like

-0.8927

0.013552

  

Niben101Scf20268g00001

LRR receptor-like serine/threonine-protein kinase ERECTA

  

-0.7116

0.011214

Niben101Scf05301g03002

LRR receptor-like serine/threonine-protein kinase ERL1

-0.7516

0.013687

-0.7589

0.013627

Niben101Scf00247g01007

LRR receptor-like serine/threonine-protein kinase ERL1

  

-0.5633

0.024694

Niben101Scf11723g02003

LRR receptor-like serine/threonine-protein kinase ERL1

-0.6679

0.026512

-0.7100

0.017084

Niben101Scf03619g03004

LRR receptor-like serine/threonine-protein kinase FEI2

-0.5426

0.018415

  

Niben101Scf03925g01010

LRR receptor-like serine/threonine-protein kinase GSO1

2.3343

0.007479

3.1551

0.041202

Niben101Scf02203g04006

Plant intracellular Ras-group-related LRR protein 4-like

  

-0.6640

0.048845

Niben101Scf00206g00014

putative F-box/LRR-repeat protein At5g02700

1.5307

0.020135

  

Niben101Scf00073g04006

probable LRR receptor-like serine/threonine-protein kinase At1g07650

  

-1.4546

0.005161

Niben101Scf00244g03004

probable LRR receptor-like serine/threonine-protein kinase At1g06840

-0.6603

0.021347

  

Niben101Scf00418g02007

probable LRR receptor-like serine/threonine-protein kinase At4g37250

  

-0.5934

0.047527

Niben101Scf00920g09027

probable LRR receptor-like serine/threonine-protein kinase At5g48740

-1.1084

0.000766

  

Niben101Scf01061g08014

probable LRR receptor-like serine/threonine-protein kinase At4g20940

  

-1.0192

0.001468

Niben101Scf01278g09008

probable LRR receptor-like serine/threonine-protein kinase At1g56140

  

0.9239

0.023952

Niben101Scf02357g08010

probable LRR receptor-like serine/threonine-protein kinase At1g07650

-0.6424

0.001803

  

Niben101Scf02665g15003

probable LRR receptor-like serine/threonine-protein kinase At1g06840

-0.5769

0.044996

  

Niben101Scf02827g07005

probable LRR receptor-like serine/threonine-protein kinase At3g47570

  

2.3756

0.027087

Niben101Scf03098g00011

probable LRR receptor-like serine/threonine-protein kinase At1g34110

  

-1.2224

3.35E-06

Niben101Scf03262g02006

probable LRR receptor-like serine/threonine-protein kinase At2g24230

  

-0.6865

0.030882

Niben101Scf03445g05005

probable LRR receptor-like serine/threonine-protein kinase At4g26540

  

-0.8802

0.000669

Niben101Scf03735g07013

probable LRR receptor-like serine/threonine-protein kinase At4g36180

2.0409

0.002356

  

Niben101Scf05348g01026

probable LRR receptor-like serine/threonine-protein kinase At1g12460

  

-1.3373

3.02E-05

Niben101Scf05405g07003

probable LRR receptor-like serine/threonine-protein kinase At3g47570

  

2.0599

0.003076

Niben101Scf05405g07006

probable LRR receptor-like serine/threonine-protein kinase At3g47570

  

1.5589

0.022376

Niben101Scf05767g05006

probable LRR receptor-like serine/threonine-protein kinase At4g20940

  

-0.8478

0.000497

Niben101Scf05977g01008

probable LRR receptor-like serine/threonine-protein kinase At1g12460

  

-1.2826

8.11E-05

Niben101Scf06144g00013

probable LRR receptor-like serine/threonine-protein kinase At4g20940

  

-0.9557

7.81E-05

Niben101Scf06151g02014

probable LRR receptor-like serine/threonine-protein kinase At1g67720

0.7683

0.046840

  

Niben101Scf06562g02013

probable LRR receptor-like serine/threonine-protein kinase At4g26540

-0.5968

0.021640

-0.9943

2.01E-05

Niben101Scf06789g03005

probable LRR receptor-like serine/threonine-protein kinase At1g67720

0.9483

0.042093

0.9711

0.042650

Niben101Scf07034g06018

probable LRR receptor-like serine/threonine-protein kinase At4g36180

  

-0.8501

0.034812

Niben101Scf07515g02006

probable LRR receptor-like serine/threonine-protein kinase At1g56140

  

0.6846

0.005558

Niben101Scf07681g01013

probable LRR receptor-like serine/threonine-protein kinase At4g20940

  

-0.7450

0.014076

Niben101Scf07695g01023

probable LRR receptor-like serine/threonine-protein kinase At4g30520

0.7628

0.001146

  

Niben101Scf07736g01007

probable LRR receptor-like serine/threonine-protein kinase At1g63430

  

0.6791

0.006612

Niben101Scf08134g02008

probable LRR receptor-like serine/threonine-protein kinase At4g37250

-0.5193

0.047055

-0.7817

0.000797

Niben101Scf10101g00023

probable LRR receptor-like serine/threonine-protein kinase At4g30520

0.6651

0.002463

  

Niben101Scf11047g00001

probable LRR receptor-like serine/threonine-protein kinase At2g16250

  

0.7640

0.047280

  1. log2FC > 0, up-regulated, log2FC < 0, down-regulated. Blank lattices show genes expression has no significant difference
  2. FC Fold change
  3. aY35AB vs. CK
  4. bY35A vs. CK