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Table 2 H gene divergence/% identity between WY- like sequences and representatives of CDV lineages

From: Phylogenetic analysis of the wild-type strains of canine distemper virus circulating in the United States

  A2 S134 GA S 99 MS S26 OH S56 AL S21 WV S5 TN WY S18 MO S20 TX Eur/SA1 A4 A3 SA3 SA2 Africa AS1 Arctic AS2 A1
A 2                     
S134 GA 95.65                    
S99 MS 95.78 99.72                   
S26 OH2 95.78 99.26 99.38                  
S56 AL 95.89 99.34 99.49 99.49                 
S21 WV 95.78 99.05 99.18 99.28 99.28                
S5 TN 95.62 98.79 98.92 99.02 99.02 99.43               
WY 96.59 97.87 98.02 98.02 98.21 97.96 97.96              
S18 MO 95.84 96.79 96.97 96.97 97.07 96.97 96.86 98.02             
S20 TX 95.75 96.99 97.11 97.03 97.26 96.96 96.88 97.76 98.02            
Eur/SA1 96.31 95.35 95.48 95.58 95.48 95.63 95.42 96.16 95.48 95.58           
A4 95.36 94.49 94.61 94.61 94.72 94.77 94.56 95.36 94.61 94.53 95.75          
A3 95.48 94.51 94.7 94.5 94.51 94.3 94.11 95.28 94.5 93.49 96.07 95.28         
SA3 95.18 94.49 94.52 94.41 94.58 94.52 94.41 94.86 94.24 94.35 95.94 94.79 95.28        
SA2 94.95 93.92 94.03 93.92 94.04 93.8 93.57 95.87 94.26 93.93 95.06 94.37 95.87 93.92       
Africa 94.52 93.56 93.7 93.59 93.75 93.59 93.42 93.87 93.86 93.12 94.79 94.19 93.52 94.24 94.03      
AS1 94.36 93.71 93.83 93.94 93.94 93.88 93.67 94.67 93.68 94.14 94.81 93.94 94.11 93.64 93.69 93.53     
Arctic 94.79 93.78 93.91 93.91 94.08 93.91 93.75 94.24 93.91 93.66 95.07 94.52 92.53 93.97 93.46 94.68 93.75    
AS2 93.89 92.99 93.12 93.12 93.12 93.01 92.85 93.81 93.12 93.15 94.09 93.32 92.34 92.82 92.08 93.42 92.7 93.64   
A1 92.62 91.61 91.73 91.83 91.84 91.78 91.57 91.7 91.58 91.4 92.75 91.66 92.14 91.83 91.16 91.89 91.06 92.32 91.01  
  1. Evaluation of “WY-like” strains detected in the US with representatives of other CDV lineages: AF378705 (A1, America-1); Z54166 (A2, America-2); HM771716 (A3, America-3 Edomex); KJ74971(A4, America-4); JF283477* (WY- 2010); AB687720 (AS1, Asia 1); AB474397 (AS2, Asia 2); FJ461723 (AFRICA); DQ226087 (Arctic); Z47761 (EU/SA1, Europe/South America 1); AM422850 (SA2, South America 2); KF835420 (SA3, South America 3). Samples from this study represented by assigned sample (S) number and state in which the dog was located
  2. *A canine distemper strain that was previously reported in association with an outbreak in Wyoming, which was linked to a domestic dog-breeding facility in Kansas in 2010 (Fig. 1, green clade)19
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