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Table 3 Differences between SH proteins among strains identical at the HVR2 region

From: Variability analysis and inter-genotype comparison of human respiratory syncytial virus small hydrophobic gene

Strains identical in HVR2 nucleotide sequences and differing in SH protein sequences

Group

Genotype

Amino acid position

Amino acid identity

SH protein region

HR15–13

A

NA1

2

G

cytoplasmic

HR186–13

E

HR119–13

A

NA1

2

E

cytoplasmic

HR129–13

G

HR175–13

A

NA1

2

G

cytoplasmic

HR372–13

E

HR116–13

A

NA1

11

S

cytoplasmic

HR134–13

T

HR2033–12

A

NA1

49

V

ectodomain

HR110–15

A

RSV3234–12

A

NA1

49–51

VFH

ectodomain

RSV5–13

HR40–14

B

BA9

49, 51

T, F

ectodomain

HR189–14

I, C

HR2154–12

B

BA9

60

K

ectodomain

HR2253–12

M

  1. Legend:- gap