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Table 1 Relative length distribution of each validated contig for each virus in positive samples

From: Metagenomic analysis of the RNA fraction of the fecal virome indicates high diversity in pigs infected by porcine endemic diarrhea virus in the United States

Virus ID < 10% 10–20% 20–30% 30–40% 40–50% 50–60% 60–70% 70–80% 80–90% > 90%
PDCoV 64 5 1 0 0 0 1 0 0 2
Enterovirus 1035 143 24 7 1 2 0 1 0 0
Kobuvirus 638 76 36 13 6 10 1 2 1 3
Mamastrovirus 3880 362 128 71 61 11 7 10 4 6
Pasivirus 125 10 4 0 0 0 0 0 0 0
Posavirus 1269 137 43 16 9 9 6 1 4 7
Sapelovirus 793 92 20 7 4 2 0 1 0 1
Sapovirus 185 42 6 4 2 0 0 0 0 0
Teschovirus 113 23 5 6 1 1 0 0 0 0
  1. Each column shows the relative size range (contig length over average length of complete genomic) of the contigs for each virus. Each row shows the count of total contigs falling within each size range, for each virus, respectively. PEDV was exclude for analysis
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