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Fig. 6 | Virology Journal

Fig. 6

From: Metagenomic analysis of viruses associated with maize lethal necrosis in Kenya

Fig. 6

Maize yellow dwarf virus (MYDV-RMV) genome organization and alignment of de novo-assembled non-overlapping contigs from symptomatic (S) and asymptomatic (A) maize, cultivated (*) or wild (**) sorghum. Labels are as in Fig. 2. a MYDV-RMV genome organization and gene expression. Open reading frames are represented by cylinders. Genomic RNA is represented by a solid line. Coordinates are based on reference sequence number MF974579.2. Every sample categorized as infected contributed one representative contig. Shorter, redundant contigs were not illustrated. b Genome coverage after reference based assembly using Bowtie v2 for one representative sample

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