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Table 4 Identity between Jeryl Lynn vaccine mumps strain and Ontario mumps whole genome sequences

From: Laboratory testing and phylogenetic analysis during a mumps outbreak in Ontario, Canada

Gene JL Major % identity JL Minor % identity
Nucleotide (%) Amino acid (%) Nucleotide (%) Amino acid (%)
Nucleocapsid Protein (NP) 94.4 98.3 94.5 98.3
Phosphoprotein (P) 92.7–92.8 89.6–89.9 91.9–92.0 87.5–87.8
Matrix (M) 93.2–93.3 99.2 92.9–93.1 99.4
Fusion (F) 92.9–93.1 94.7–95.1 94.3–94.5 96.0–96.4
Small Hydrophobic (SH) 87.3 85.9 85.0 82.4
Hemagglutinin–Neuraminidase (HN) 91.0 94.5 91.9 95.3
Large Protein (L) 94.0 98.8–98.9 94.2–94.3 98.7–98.8
  1. JL Jeryl Lynn