Table 4 Identity between Jeryl Lynn vaccine mumps strain and Ontario mumps whole genome sequences
From: Laboratory testing and phylogenetic analysis during a mumps outbreak in Ontario, Canada
Gene | JL Major % identity | JL Minor % identity | ||
|---|---|---|---|---|
Nucleotide (%) | Amino acid (%) | Nucleotide (%) | Amino acid (%) | |
Nucleocapsid Protein (NP) | 94.4 | 98.3 | 94.5 | 98.3 |
Phosphoprotein (P) | 92.7–92.8 | 89.6–89.9 | 91.9–92.0 | 87.5–87.8 |
Matrix (M) | 93.2–93.3 | 99.2 | 92.9–93.1 | 99.4 |
Fusion (F) | 92.9–93.1 | 94.7–95.1 | 94.3–94.5 | 96.0–96.4 |
Small Hydrophobic (SH) | 87.3 | 85.9 | 85.0 | 82.4 |
Hemagglutinin–Neuraminidase (HN) | 91.0 | 94.5 | 91.9 | 95.3 |
Large Protein (L) | 94.0 | 98.8–98.9 | 94.2–94.3 | 98.7–98.8 |