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Table 4 DEGs involved in DNA repair

From: Transcriptome profiling of whitefly guts in response to Tomato yellow leaf curl virus infection

Category or gene ID

Homologous functiona

Species

FCb

DNA repair

 c45190_g1

DNA ligase aden and DNA ligase OB domain

Trichuris trichiura

−1.5

 c39710_g1

DNA polymerase I

Trichuris trichiura

−1.8

 c23489_g3

DNA polymerase III subunit alpha

Capitella teleta

−1.7

 c30501_g2

DNA polymerase III subunit epsilon

Capitella teleta

2.0

 c20205_g4

ATP-dependent DNA helicase srs2-like

Plutella xylostella

3.1

 c20205_g1

ATP-dependent DNA helicase srs2-like

Plutella xylostella

2.6

 c4255_g1

MutS protein-like protein 4, partial

Zootermopsis nevadensis

−3.7

 c21553_g1

DNA glycosylase

Lasius niger

−2.4

 c37356_g1

Uracil-DNA glycosylase

Capitella teleta

−2.1

Cell cycle checkpoints

 c32780_g1

RAD50-interacting protein 1

Zootermopsis nevadensis

1.0

 c34907_g2

Cell cycle checkpoint protein RAD1 isoform X2

Cerapachys biroi

1.0

 c23966_g1

Transformation/transcription domain protein

Zootermopsis nevadensis

2.5

 c15302_g2

Transformation/transcription domain protein

Acyrthosiphon pisum

3.6

E3 ubiquitin ligase

 c37868_g1

G2/M phase-specific E3 ubiquitin-protein ligase

Danio rerio

2.4

 c28057_g2

G2/M phase-specific E3 ubiquitin-protein ligase

Saccoglossus kowalevskii

1.6

 c14143_g1

G2/M phase-specific E3 ubiquitin-protein ligase

Danio rerio

1.7

 c37987_g1

G2/M phase-specific E3 ubiquitin-protein ligase

Gallus

2.9

 c50210_g1

G2/M phase-specific E3 ubiquitin-protein ligase

Crassostrea gigas

1.6

 c35060_g2

E3 ubiquitin-protein ligase HUWE1

Daphnia pulex

1.2

 c13801_g1

Hect E3 ubiquitin ligase

Pediculus humanus

1.1

 c27270_g1

E3 ubiquitin-protein ligase BRE1-like

Diaphorina citri

1.1

 c29883_g1

NEDD4-like E3 ubiquitin-protein ligase WWP1

Zootermopsis nevadensis

1.0

 c31381_g2

Apoptosis-resistant E3 ubiquitin protein ligase 1

Athalia rosae

1.0

  1. Displayed are the fold changes of DEGs involved in DNA repair of viruliferous guts in comparison to nonviruliferous guts. log2 ratio ≥ 1 and q ≤ 0.05 are used as the threshold
  2. aThe function of the homologous gene
  3. bFC, fold change (log2 ratio) of gene expression