Table 3 Comparison of the predicted pp1a/pp1b cleavage site sequencesa of BatCoV-Ita1/2 with prototype clade c betacoronaviruses and MERS related strains
| Â | NSP1 | NSP2 | NSP3 | NSP4 | NSP5 | NSP6 | NSP7 | NSP8 | NSP9 | NSP10 | NSP11 | NSP12 | NSP13 | NSP14 | NSP15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BatCoV-Ita1/2 | LVGG | LKGG | IVGG | LQS | MQS | VQS | LQA | LQN | LQA | TQS | RGSI | LQA | LQS | VQG | LQA |
MERSb | -I-- | – | – | – | – | M-- | – | – | – | P-- | – | – | – | – | – |
HKU4c | -I-- | – | – | – | – | – | – | – | – | P-- | GS-V | – | – | – | – |
HKU5d | – | – | LS-- | – | – | – | – | – | – | P-- | – | – | – | I-- | – |
Erinaceuse | -C-- | – | – | – | – | – | --S | – | – | LH- | – | – | – | – | – |
NeoCoVf | -T-- | – | – | – | – | I-- | – | – | – | P-- | – | – | – | – | – |
BtVs-BetaCoV/SC2013g | – | – | – | – | – | – | – | – | – | P-- | – | – | – | – | – |