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Fig. 2 | Virology Journal

Fig. 2

From: Prevalence and genetic diversity analysis of human coronaviruses among cross-border children

Fig. 2

Phylogenetic analysis based on partial S genes of OC43, HKU1 and NL63. (I) Phylogenetic tree of OC43 S genes (2.2 kb) constructed with maximum likelihood; (II) Phylogenetic tree of HKU1 S genes (2.4 kb) constructed with maximum likelihood; (III) Phylogenetic tree of NL63 S genes (4.0 kb) constructed with neighbour-joining. Our samples were indicated with a red spot and others were used as referenced strains from complete genomes in GenBank. The strains indicated with “*” were clustered into genotype E, recombinant of B, C and D. The OC43 and NL63 phylogenetic trees were constructed using BCoV and Bat CoV respectively as outgroup

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