Skip to main content

Table 3 Neutrality tests, haplotype and nucleotide diversity of Turnip mosaic virus sub-populations

From: The genetic structure of Turnip mosaic virus population reveals the rapid expansion of a new emergent lineage in China

Group

Haplotype diversity

Nucleotide diversity

Tajima’s D

Fu and Li’s D

Fu and Li’s F

Tai’an

basal-BR II

0.890

(0.073)

0.00322

(0.00062)

−2.19554**

−2.72246*

−2.72246**

basal-BR III

1.000

(0.126)

0.00417

(0.00073)

−1.18441

−1.18441

−1.24511

Asian-BR

0.939

(0.058)

0.00661

(0.00130)

−0.95449

−0.79711

−0.95432

Weifang

basal-BR II

0.960

(0.031)

0.00490

(0.00073)

−2.39975**

−3.45534 **

−3.66541**

Asian-BR

0.987

(0.023)

0.01159

(0.00161)

−1.22279

−1.79120

−1.88684

Changchun

basal-BR

0.982

(0.046)

0.00478 (0.00095)

−1.63909

−2.06292

−2.21575

  1. The sub-populations less than four isolates were not included
  2. *: P < 0.05,**: P < 0.02