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Table 3 Neutrality tests, haplotype and nucleotide diversity of Turnip mosaic virus sub-populations

From: The genetic structure of Turnip mosaic virus population reveals the rapid expansion of a new emergent lineage in China

Group Haplotype diversity Nucleotide diversity Tajima’s D Fu and Li’s D Fu and Li’s F
Tai’an basal-BR II 0.890 (0.073) 0.00322 (0.00062) −2.19554** −2.72246* −2.72246**
basal-BR III 1.000 (0.126) 0.00417 (0.00073) −1.18441 −1.18441 −1.24511
Asian-BR 0.939 (0.058) 0.00661 (0.00130) −0.95449 −0.79711 −0.95432
Weifang basal-BR II 0.960 (0.031) 0.00490 (0.00073) −2.39975** −3.45534 ** −3.66541**
Asian-BR 0.987 (0.023) 0.01159 (0.00161) −1.22279 −1.79120 −1.88684
Changchun basal-BR 0.982 (0.046) 0.00478 (0.00095) −1.63909 −2.06292 −2.21575
  1. The sub-populations less than four isolates were not included
  2. *: P < 0.05,**: P < 0.02