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Table 3 Neutrality tests, haplotype and nucleotide diversity of Turnip mosaic virus sub-populations

From: The genetic structure of Turnip mosaic virus population reveals the rapid expansion of a new emergent lineage in China

Group Haplotype diversity Nucleotide diversity Tajima’s D Fu and Li’s D Fu and Li’s F
Tai’an basal-BR II 0.890
(0.073)
0.00322
(0.00062)
−2.19554** −2.72246* −2.72246**
basal-BR III 1.000
(0.126)
0.00417
(0.00073)
−1.18441 −1.18441 −1.24511
Asian-BR 0.939
(0.058)
0.00661
(0.00130)
−0.95449 −0.79711 −0.95432
Weifang basal-BR II 0.960
(0.031)
0.00490
(0.00073)
−2.39975** −3.45534 ** −3.66541**
Asian-BR 0.987
(0.023)
0.01159
(0.00161)
−1.22279 −1.79120 −1.88684
Changchun basal-BR 0.982
(0.046)
0.00478 (0.00095) −1.63909 −2.06292 −2.21575
  1. The sub-populations less than four isolates were not included
  2. *: P < 0.05,**: P < 0.02