Skip to main content

Advertisement

Table 2 Estimates of genetic differentiation among sites (F ST) within each region

From: The genetic structure of Turnip mosaic virus population reveals the rapid expansion of a new emergent lineage in China

Gene Parameter WF between WF TA between TA WF between TA WF between CC TA between CC CC between CC
CP Ks(P-value) 3.16314
(1.0000)
3.12325
(1.0000)
3.14501
(0.1200)
3.01985
(0.0080**)
2.90505
(0.0120*)
2.41801
(1.0000)
Z (P-value) 1935.22093
(1.0000)
1367.97222
(1.0000)
1618.33343
(0.2990)
740.62579
(0.0080**)
534.81963
(0.0060**)
143.22727
(1.0000)
Snn (P-value) 0.08081
(1.0000)
0.12416
(1.0000)
0.66143 **
(0.0030)
0.88492
(0.0000***)
0.85305
(0.0000***)
0.10000
(1.0000)
F ST −0.02326 −0.02778 −0.00436 0.15467 0.15485 −0.09091
Nm −11.00 −9.25 −57.56 1.37 1.36 −3.00
UTR Ks*(P-value) 1.19299
(1.0000)
0.96193
(1.0000)
1.08658
(0.5460)
0.94143
(0.0570) ns
1.13222
(0.0420*)
0.88305
(0.9280) ns
Z (P-value) 1844.07143
(1.0000)
1362.22222
(1.0000)
1581.52519
(0.4120)
552.71858
(0.0680) ns
723.74704
(0.0470*)
140.95455
(1.0000) ns
Snn (P-value) 0.34906
(1.0000)
0.39139
(1.0000)
0.52678
(0.1430)
0.68796
(0.0230*)
0.69754
(0.0780) ns
0.31111
(1.0000) ns
F ST −0.02381 −0.02778 −0.01268 0.08893 0.11459 −0.09091
Nm −10.75 −9.25 −19.96 2.56 1.83 −3.00
  1. WF isolates from Weifang of Shandong province, TA isolates from Tai’an of Shandong province, CC isolates from Changchun of Jilin province
  2. ns not significant; *, 0.01 < P < 0.05; **, 0.001 < P < 0.01; ***, P < 0.001. Determined using 1000 permutations