From: Outbreak tracking of Aleutian mink disease virus (AMDV) using partial NS1 gene sequencing
Position in the partial NS1 sequence: | Saeby cluster Nucleotides: Amino acid: | Holstebro cluster Nucleotides: Amino acid: | Zealand cluster Nucleotides: Amino acid: |
---|---|---|---|
32–34 | CAA: Q | CAC: H | CAA: Q |
50–52 | TTT: F | TTG/TTA: L | TTG: L |
53–55 | ATA: I | CTT: L | ATT: I |
59–61 | AGA: R | AGA: R | AAA: K |
62–64 | CTA: L | ATA: I | ATA: I |
80–82 | GTT: V | TGT: C | GCT: A |
104–106 | GAC: D | AAC/GAC: N/D | GAC: D |
107–109 | ATA: I | CAA: Q | CAA: Q |
131–133 | GAT: D | GCT/GAT: A/D | GCT: A |
140–142 | AAG: K | GAT/AAT/AGT: D/N/S | GAT: D |
230–232 | AAC: N | ACC: T | AAC: N |
248–250 | ATT: I | CTA/ATA/ATG: L/I/M | ATG: M |
278–280 | AAT: N | CAT: H | CAT: H |
287–289 | GGT: G | AGT: S | AAT: N |
302–304 | TTT: F | TAT: Y | TAT: Y |
323–325 | ATT: I | TTA: L | GGT: V |
326–328 | ATT: I | ATT: I | GTT: V |