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Table 3 Similarity between expressed sequence tags in the rverse suppression subtractive hybridization library and genes in GenBank

From: Cyclophilin B facilitates the replication of Orf virus

EST No. Species Gene homology Gene name Fold downregulation
R-1 Bos Taurus Bos taurus mitogen-activated protein kinase kinase 4 (MAP2K4), mRNA. MAP2K4/MKK4 8.7
R-2 Bos Taurus Bos taurus neuroplastin (NPTN), mRNA NPTN 1.9
R-3 Bos Taurus Bos taurus nuclear transport factor 2 (NUTF2), mRNA NUTF2 2.5
R-4 Bos Taurus Bos taurus S100 calcium binding protein A4 (S100A4), mRNA S100A4 9.6
R-5 Bos Taurus Bos taurus acyl-CoA synthetase long-chain family member 5 (ACSL5), mRNA, complete cds ACSL5 2.9
R-6 Bos Taurus Bos taurus eukaryotic translation elongation factor 2 (EEF2), mRNA EEF2 3.8
R-7 Bos Taurus Bos taurus poly-U binding splicing factor 60KDa (PUF60), mRNA PUF60 1.3
R-8 Bos Taurus Bos taurus H3 histone, family 3B (H3.3B) (H3F3B), mRNA H3F3B 2.6
R-9 Bos Taurus Bos taurus glyceraldehyde-3-phosphate dehydrogenase (GAPDH), mRNA GAPDH 1.2
R-10 Bos Taurus Bos taurus NADH dehydrogenase (ubiquinone) complex I, assembly factor 1 (NDUFAF1), mRNA NDUFAF1 1.7
R-11 Bos Taurus Bos taurus solute carrier family 51, beta subunit (SLC51B), mRNA SLC51B 3.2
R-12 Bos Taurus Bos taurus ferredoxin 1 (FDX1), mRNA FDX1 2.5
R-13 Bos Taurus Bos taurus transforming growth factor beta 1 induced transcript 1 (TGFB1I1), mRNA TGFB1I1 1.4
R-14 Bos Taurus Bos taurus heat shock 70 kDa protein 8 (HSPA8), mRNA HSPA8 10.2
R-15 Bos Taurus Bos taurus vimentin (VIM), mRNA VIM 6.4
R-16 Bos Taurus Bos taurus lectin, galactoside-binding, soluble, 1 (LGALS1), mRNA LGALS1 2.1
R-17 Bos Taurus Bos taurus clone IMAGE:7,961,517 NDP kinase NBR-A mRNA, complete cds NDP kinase NBR-A 1.5
R-18 Bos Taurus Bos taurus polymerase (RNA) I polypeptide D (POLR1D), mRNA POLR1D 1.5
R-19 Bos Taurus Bos taurus guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 (GNAI1), mRNA GNAI1 1.2
R-20 Bos Taurus Bos taurus annexin A2 (ANXA2), mRNA ANXA2 1.9
R-21 Bos Taurus Bos taurus Williams Beuren syndrome chromosome region 22 (WBSCR22), mRNA WBSCR22 2.3