Table 3 Similarity between expressed sequence tags in the rverse suppression subtractive hybridization library and genes in GenBank
From: Cyclophilin B facilitates the replication of Orf virus
EST No. | Species | Gene homology | Gene name | Fold downregulation |
|---|---|---|---|---|
R-1 | Bos Taurus | Bos taurus mitogen-activated protein kinase kinase 4 (MAP2K4), mRNA. | MAP2K4/MKK4 | 8.7 |
R-2 | Bos Taurus | Bos taurus neuroplastin (NPTN), mRNA | NPTN | 1.9 |
R-3 | Bos Taurus | Bos taurus nuclear transport factor 2 (NUTF2), mRNA | NUTF2 | 2.5 |
R-4 | Bos Taurus | Bos taurus S100 calcium binding protein A4 (S100A4), mRNA | S100A4 | 9.6 |
R-5 | Bos Taurus | Bos taurus acyl-CoA synthetase long-chain family member 5 (ACSL5), mRNA, complete cds | ACSL5 | 2.9 |
R-6 | Bos Taurus | Bos taurus eukaryotic translation elongation factor 2 (EEF2), mRNA | EEF2 | 3.8 |
R-7 | Bos Taurus | Bos taurus poly-U binding splicing factor 60KDa (PUF60), mRNA | PUF60 | 1.3 |
R-8 | Bos Taurus | Bos taurus H3 histone, family 3B (H3.3B) (H3F3B), mRNA | H3F3B | 2.6 |
R-9 | Bos Taurus | Bos taurus glyceraldehyde-3-phosphate dehydrogenase (GAPDH), mRNA | GAPDH | 1.2 |
R-10 | Bos Taurus | Bos taurus NADH dehydrogenase (ubiquinone) complex I, assembly factor 1 (NDUFAF1), mRNA | NDUFAF1 | 1.7 |
R-11 | Bos Taurus | Bos taurus solute carrier family 51, beta subunit (SLC51B), mRNA | SLC51B | 3.2 |
R-12 | Bos Taurus | Bos taurus ferredoxin 1 (FDX1), mRNA | FDX1 | 2.5 |
R-13 | Bos Taurus | Bos taurus transforming growth factor beta 1 induced transcript 1 (TGFB1I1), mRNA | TGFB1I1 | 1.4 |
R-14 | Bos Taurus | Bos taurus heat shock 70Â kDa protein 8 (HSPA8), mRNA | HSPA8 | 10.2 |
R-15 | Bos Taurus | Bos taurus vimentin (VIM), mRNA | VIM | 6.4 |
R-16 | Bos Taurus | Bos taurus lectin, galactoside-binding, soluble, 1 (LGALS1), mRNA | LGALS1 | 2.1 |
R-17 | Bos Taurus | Bos taurus clone IMAGE:7,961,517 NDP kinase NBR-A mRNA, complete cds | NDP kinase NBR-A | 1.5 |
R-18 | Bos Taurus | Bos taurus polymerase (RNA) I polypeptide D (POLR1D), mRNA | POLR1D | 1.5 |
R-19 | Bos Taurus | Bos taurus guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 (GNAI1), mRNA | GNAI1 | 1.2 |
R-20 | Bos Taurus | Bos taurus annexin A2 (ANXA2), mRNA | ANXA2 | 1.9 |
R-21 | Bos Taurus | Bos taurus Williams Beuren syndrome chromosome region 22 (WBSCR22), mRNA | WBSCR22 | 2.3 |