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Table 3 Locations of predicted ORFs in the genome of AcCoV-JC34

From: Detection of alpha- and betacoronaviruses in rodents from Yunnan, China

ORF

Location (nt)

Length (nt/aa)

TRS location

TRS sequence(s) (distance to AUG)

1ab

437–20376 (shift at 12361)

19940/6645

181

CAACTCAACUAAACG(247)ATG

S

20376–23756

3381/1126

20306

TGGTAAACUUATTGTTAG(64)ATG

3

23753–24397

645/214

23711

TGTTGUACUAAACCT(36)ATG

E

24397–24633

237/78

24392

CCACTTAACUA A TG

M

24643–25389

747/248

24636

TTGATCAACUAAAATG

6

25401–25901

501/166

25389

GGTCTAAACUAAACCATTATG

N

25903–27072

1170/389

25896

AATTTCAACUAAAATG

8

26530–27702

543/180

26484

TAGATCGCACUAA(40)ATG

9

27074/27391

318/105

27060

TGATGAAACUAACGCCTAAAATG

  1. Start codons are underlined. The conserved (AACUAA) or variant (AACUUA, UACUAA, CACUAA) TRS core sequences are highlighted in bold