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Table 3 CP amino acid sequences of begomoviruses used for phylogenetic analysis

From: Development and application of triple antibody sandwich enzyme-linked immunosorbent assays for begomovirus detection using monoclonal antibodies against Tomato yellow leaf curl Thailand virus

Begomovirus species-[isolate]

Serological reactivity

Host

Location

GenBank Accession no.

M1

D2

Begomoviruses identified in this study

 TYLCTHV-[To-SB-2]

+

+

Tomato

Saraburi

KX900496

 TbLCYnV-[To-CM]

+

+

Tomato

Chiang Mai

KX900493

 PepLCV-[Pe-SP-11]

±

±

Pepper

Suphan Buri

KX900490

 AYVV-[To-SB-9]

±

±

Tomato

Saraburi

KX900488

 ToLCNDV-[Cu-KK]

-

+

Cucumber

Khon Kaen

KX900494

 SLCCNV-[Pk-NP]

-

+

Pumpkin

Nakhon Pathom

KX900492

 BYVMV-[Ok-CM]

-

-

Okra

Chiang Mai

KX900489

 PepYLCIV-[Pe-PN-1]

-

-

Pepper

Phang Nga

KX900491

 TYLCKaV-[Ep-CM]

-

-

Eggplant

Chiang Mai

KX900495

Previously reported tomato yellow leaf curl begomoviruses

 TYLCCNV-[BS1]*

nd

nd

Tomato

China:Yunnan

AJ319675

 TYLCIDV-[ID-Lem-05]*

nd

nd

Tomato

Indonesia:Lembang

AF189018

 TYLCV-[IL-Reo-86]*

nd

nd

Tomato

Israel

X15656

  1. Abbreviations: TYLCTHV Tomato yellow leaf curl Thailand virus, TbLCYnV Tobacco leaf curl Yunnan virus, PepLCV Pepper leaf curl virus, AYVV Agerratum yellow vein virus, SLCCNV Squash leaf curl China virus, ToLCNDV Tomato leaf curl New Delhi virus, BYVMV Bhendi yellow vein mosaic virus, PepYLCIV Pepper yellow leaf curl Indonesia virus, TYLCKaV Tomato yellow leaf curl Kanchanaburi virus, TYLCCNV Tomato yellow leaf curl China virus, TYLCIDV Tomato yellow leaf curl Indonesia virus, TYLCV Tomato yellow leaf curl virus, nd not determined. Asterisks indicate the related tomato yellow leaf curl begomovirus species for phylogenetic comparison