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Table 4 Comparison of differences in number of reads and genome coverage of three samples prepared with and without capture of NDV RNA

From: A robust and cost-effective approach to sequence and analyze complete genomes of small RNA viruses

Virus designation Number of reads % fewer reads without capture Identity of consensus sequences Missing sequences at genome termini and internal gaps (in number of nucleotides)
With capture Without capture With capture Without capture
5′ gaps 3′ 5′ gaps 3′
691 403515 283501 29.7 100% 20 0 0 26 0 0
698 363962 262452 27.9 100% 0 0 0 25 0 0
901 415661 285405 31.3 100% 0 94 0 22 84 0