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Table 1 Primers for amplifying the complete genome

From: Genomic organization and recombination analysis of a porcine sapovirus identified from a piglet with diarrhea in China

Primer name

Primer sequence (5’-3’)

Position

References

SAVP1F

GTGATCGTGATGGCTAATTGC

1-21

JX678943

SAVP1R

GAACTGTTTCAACACTGT

622-639

JX678943

SAVP2F

GGGACATGTGGCAGTAC

533-549

JX678943

SAVP2R

TTGAAGTAGTCCACTATCCACAT

1087-1109

JX678943

SAVP3F

ACTGACAAGTTTGCTGA

862-878

JX678943

SAVP3R

GTGTGGGGCAATTGGTGGT

1660-1678

JX678943

SAV4FW

TTGAATTGTGACCGGCCAGAG

1600-1620

KX688107

SAVP5R

TCATCATACTCATCGTCCCT

2863-2882

JX678943

SAVP6F

CTGAACACCCGTGA

2782-2795

JX678943

SAVP9R

AGCACAGCCATGGCAAAG

4551-4568

JX678943

SAVP10F

CCATAGCCACACTGTGTTCAC

4427-4447

JX678943

SAVP10R

TCTTCATCTTCATTGGTGGGAG

5102-5123

JX678943

SAVP11F

CCAAGGGCAGTGTTTGAC

4963-4980

JX678943

SAVP11R

GGTTGGTACACATAAAGTGCC

5676-5696

JX678943

SAVP12F

GATGTTAGGGCGGTGGA

5620-5636

JX678943

SAVP12R

AGGTGAAAGTGGTGTCTTCTG

6674-6694

JX678943

SAVP13F

CTCGGCACGCACACGGG

6469-6485

JX678943

SAVP13R

TGATTGGCAGGTAAATTTG

6961-6979

JX678943

SAV14N

GATGGAGTTGGCTAAAGAACA

6893-6913

KX688107

QT

CCAGTGAGCAGAGTGACGAGGACTCGAGCTCAAGCTTTTTTTTTTTTTTTTT

 

[17]

QO

CCAGTGAGCAGAGTGACG

 

[17]

QI

GAGGACTCGAGCTCAAGC

 

[17]