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Fig. 2 | Virology Journal

Fig. 2

From: Mosquito-borne Inkoo virus in northern Sweden - isolation and whole genome sequencing

Fig. 2

Phylogenetic analysis of the INKV S segment in comparison to 17 other viruses belonging to the California serogroup using the Maximum Likelihood method based on the Tamura-Nei model [20]. The new isolate INKV strain from Lövånger (indicated in bold) clustered most closely with INKV strains Finland, Jamestown Canyon virus and Jerry Slough virus. There were a total of 1,104 positions in the final dataset. Evolutionary analyses were conducted in MEGA6 [19]. Accession numbers; California encephalitis virus (E6071) U12800.1, Morro Bay virus (U31989.1), Tahyna virus strain (XJ0625), Tahyna virus strain XJ0625 (EU622820.2), La Crosse virus (K00610.1), Snowshoe hare virus (EU294510.1), San Angelo virus VR723 (U47139.1), Trivittatus virus strain Eklund (KR149247.1), Melao virus TRVL9375 (U12802.1), Keystone virus strain KEYV (KT630293.1), Serra do Navio virus BeAr 103645 (U47140.1), Jerry Slough virus BFS4474 (U12798.1), Jamestown Canyon virus strain 3324-04 (HM007356.1), INKV Prototype KN3641 (U47137.1), INKV strain KN3641 (Z68496.1), INKV strain Lövånger, larvae (KU302751.1), the study isolate INKV Lövånger, mosquito (KX554935), INKV SWAR 83-161 (IVU47138.1), and Chatanga virus strain LEIV-15852 EU541240.1 respectively

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