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Table 1 RNA-seq reads and map rate

From: Transcriptional profiling of host cell responses to encephalomyocarditis virus (EMCV)

 

Total reads

Clean reads

Hamster genome map rate

EMCV genome map rate

Total map rate

Mock

115833567

114848982

72.6%

0

72.6%

12 hpi

115104413

113918838

67.3%

0

67.3%

24 hpi

115831959

114777888

65.3%

7.2%

72.5%

30 hpi

115829611

114833476

34.1%

41.5%

75.6%